Evidence map›Paper›PMID 40596486›Full record

ArticleScientific reports2025

Investigation of in-vivo and in-silico toxicity induced by environmental drug contamination in a non-target organism.

Numan Annakkaya, Kültiğin Çavuşoğlu, Emine Yalçin, Burak Özkan

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Numan AnnakkayaDepartment of Biology, Institute of Science, Giresun University, Giresun, Turkey.
Kültiğin ÇavuşoğluDepartment of Biology, Faculty of Science and Art, Giresun University, 28200, Giresun, Turkey.
Emine YalçinDepartment of Biology, Faculty of Science and Art, Giresun University, 28200, Giresun, Turkey. emine.yalcin@giresun.edu.tr.
Burak ÖzkanDepartment of Biology, Institute of Science, Giresun University, Giresun, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, the toxicity induced by metronidazole, one of the most preferred pharmaceutical active ingredients worldwide, in Allium cepa L, a non-target organism, was investigated. Many genetic (mitotic index = MI, micronucleus = MN and chromosomal abnormalities = CAs) and biochemical (malondialdehyde = MDA, proline, superoxide dismutase = SOD, catalase = CAT, chlorophyll a and b) parameters have been used as indicators of toxicity. Furthermore, the degree of DNA damage caused by metronidazole was investigated by the Comet assay method. On the other hand, metronidazole toxicity was also supported using the in silico method in a computer environment. Four groups of A. cepa bulbs were created, including three treatments and a control. Metronidazole doses of 125, 250, and 500 mg/L were used to germinate the onions in the treatment groups, while tap water was used to germinate the onions in the control group. Samples taken from roots and leaves were used in measurements and physiological examinations. Consequently, the maximum MI value and chlorophyll amounts were measured in the control group. In addition, the lowest MN and CAs numbers, MDA and proline levels, and SOD and CAT activities were also measured in this group. Metronidazole exposure caused notable (p < 0.05) declines in MI value and chlorophyll amounts, and notable increases (p < 0.05) in MN and CAs numbers, MDA and proline levels, and SOD and CAT activities, depending on the dose. Metronidazole exposure promoted CAs such as sticky chromosome, bridge, vagrant chromosome, nuclear bud, and binuclear cell in root meristem cells. Comet assay findings revealed significant decreases (p < 0.05) in the percentage of head DNA and significant increases (p < 0.05) in the percentage of tail DNA depending on the metronidazole dose, and this indicated DNA damage. The in silico study's findings supported the genetic and biochemical toxicity results by showing the direct interaction of metronidazole with DNA, tubulin proteins, topoisomerase enzymes and enzymes responsible for chlorophyll synthesis. Consequently, it has been demonstrated that metronidazole may cause multifaceted toxicity in non-target organisms if it goes beyond its medical use and spreads into the environment. In addition, once more, it has been established that A. cepa is a trustworthy indicator organism for figuring out this toxicity.

Indexed as

Environmental PollutantsMetronidazoleOnionsCatalaseChlorophyllChromosome AberrationsComputer SimulationDNA DamageMalondialdehydeMitotic IndexPlant LeavesPlant RootsProlineSuperoxide DismutaseCatalaseChlorophyllEnvironmental PollutantsMalondialdehydeMetronidazoleProlineSuperoxide DismutaseAllium cepaAntioxidant enzymesComet assayGenotoxicityMetronidazole

Identifiers

PMID40596486
PMCPMC12215872

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.