Evidence map›Paper›PMID 40595703›Full record

ArticleScientific reports2025

The identification Mycobacterium tuberculosis genes that modulate long term survival in the presence of rifampicin and streptomycin.

Johana E Hernández Toloza, Ye Xu, Tom A Mendum, Bianca Sica Siedler, Rosalyn Casey, Huihai Wu, Kerstin Williams, Suzanne Hingley-Wilson, Johnjoe McFadden

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Deciphering the different Mycobacterium avium complex infections of HIV and non-HIV patients by bacterial GWAS and immune cells flow cytometry.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Johana E Hernández TolozaDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Ye XuDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Tom A MendumDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Bianca Sica SiedlerDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Rosalyn CaseyDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Huihai WuBioinformatics Facility, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Kerstin WilliamsDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
Suzanne Hingley-WilsonDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK. s.hingley-wilson@surrey.ac.uk.
Johnjoe McFaddenDepartment of Microbial Sciences, School of Biosciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK. j.mcfadden@surrey.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/J002097/1Biotechnology and Biological Sciences Research Council BB/L022869/1Medical Research Council MR/N007328/1 and MR/T028998/1
6 · The paper itself

Abstract

In 2023, Mycobacterium tuberculosis (Mtb) caused 10.6 million new tuberculosis cases and 1.3 million deaths. The WHO proscribed treatment is not always successful, even when strains were sensitive to the antibiotics.as clinical Mtb populations contain phenotypically tolerant subpopulations, termed persisters. Here a Mtb transposon library was challenged with rifampicin (RIF) and streptomycin (STM) under conditions designed to identify genes that modulate persister frequency. Mutants with reduced survival in RIF were predominantly in genes associated with membrane integrity e.g. arabinogalactan assembly genes cpsA/lytR/Psr, whilst for STM, reduced survival was associated with toxin/antitoxin genes. Some mutations enhanced survival. For RIF these included the methyl citrate cycle genes prpC, prpD and prpR, and the trkA-C K

Indexed as

Genes, BacterialMycobacterium tuberculosisRifampinStreptomycinAntitubercular AgentsBacterial ProteinsDrug Resistance, BacterialMicrobial Sensitivity TestsMicrobial ViabilityMutationAntitubercular AgentsBacterial ProteinsRifampinStreptomycinCell wallMethylcitrate cycleMycobacterium tuberculosisPersisterToleranceTransposon library

Identifiers

PMID40595703
PMCPMC12216072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.