Evidence map›Paper›PMID 40594815›Full record

ArticleScientific reports2025

Identification of ferroptosis related genes and subtypes in colorectal cancer.

Jun Hu, Jian Li, Yixuan Dong, Xin Yue, Wenpeng Wang, Hongbo Zhang, Dalu Kong

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 citing paper in PubMed.

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5 · Who and what money

Authors and funding

7 authors.

Jun Hu *Department of Colorectal Cancer Surgery, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy of Tianjin, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, No.1 Huanhu West Road, Hexi District, Tianjin, 300060, People's Republic of China.
Jian Li *Department of Internal Medicine, Tianjin University Hospital, Tianjin University, Tianjin, 300072, People's Republic of China.
Yixuan Dong *Department of Oncology, Tianjin Academy of Traditional Chinese Medicine Affiliated Hospital, Tianjin, 300120, China.
Xin YueDepartment of Colorectal Cancer Surgery, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy of Tianjin, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, No.1 Huanhu West Road, Hexi District, Tianjin, 300060, People's Republic of China.
Wenpeng WangDepartment of Colorectal Cancer Surgery, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy of Tianjin, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, No.1 Huanhu West Road, Hexi District, Tianjin, 300060, People's Republic of China.
Hongbo ZhangTianjin Marvel Medical Laboratory, Tianjin Marvelbio Technology Co., Ltd, Tianjin, 300381, People's Republic of China.
Dalu KongDepartment of Colorectal Cancer Surgery, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy of Tianjin, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, No.1 Huanhu West Road, Hexi District, Tianjin, 300060, People's Republic of China. drkongdalu@163.com.

Funding

Chinese Anti-Cancer Association- HengRui Anti-angiogenesis Targeted Tumor Research Fund No.2021001045the National Natural Science Foundation Cultivation Project No.210208the Scientific Research Translational Foundation of Wenzhou Safety (Emergency) Institute of Tianjin University No. TJUWYY2022025
6 · The paper itself

Abstract

Colorectal cancer (CRC) is the third most common cancer and the second leading cause of cancer-related deaths worldwide. Increasing evidence has shown that ferroptosis plays a significant regulatory role in the occurrence and progression of cancer. However, new biomarkers associated with ferroptosis and new ferroptosis-related subtypes in CRC remain to be identified. We collected a colon adenocarcinoma (COAD) dataset from the cancer genome atlas (TCGA) database in UCSC Xena. Ferroptosis-related genes (FRGs) were extracted from the dataset, and we conducted gene expression profiling interactive analysis (GEPIA), cBioPortal analysis, and immune cell infiltration analysis. Additionally, we used the "ConsensusClusterPlus" R package to identify ferroptosis-related subtypes of CRC. Based on these subtypes, we analyzed their prognostic features, gene co-expression networks, and the ferroptosis landscape. We identified 21 FRGs in COAD. The genes RBMS1, NOX4, FABP4, CYB5R1, CPEB1, and ATM were significantly and positively correlated with immune cell infiltration and poor prognosis. Furthermore, we identified two COAD subtypes related to prognosis and ferroptosis (ferroptosis subtype 1 [FS1] and ferroptosis subtype 2 [FS2]). These subtypes were associated with tumor mutation burden (TMB), mutation status, immunogenic cell death (ICD), and immune checkpoint (ICP) regulatory genes. Finally, we established a ferroptosis landscape of COAD. We identified key ferroptosis-related genes and defined two distinct ferroptosis-associated subtypes in CRC that differ significantly in prognosis and immune infiltration. These findings provide new insights into the interaction between ferroptosis and the tumor immune microenvironment, offering potential biomarkers and therapeutic targets for improved diagnosis and personalized treatment of colorectal cancer.

Indexed as

AdenocarcinomaColorectal NeoplasmsFerroptosisBiomarkers, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansPrognosisBiomarkers, TumorColorectal cancerConsensus clusterFerroptosisTCGA

Identifiers

PMID40594815
PMCPMC12216747

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