Evidence map›Paper›PMID 40594389›Full record

ArticleScientific reports2025

Copper only SOD repeat proteins likely act as an extracellular superoxide dismutase in oyster antioxidant defense.

Li Tan, Youli Liu, Yueyang Sun, Sheng Liu, Zhihua Lin, Qinggang Xue

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Fine-tuning alkyl chain length in copper(II) complexes: effects on DNA binding and catalytic cleavage.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2026
    Article
  2. Copper, cuproptosis, and cancer: biology concepts of a novel cell death.Apoptosis : an international journal on programmed cell death · 2026
    Review
  3. From hemocuprein to CSRP: the many faces of Cu/Zn superoxide dismutase.Metallomics : integrated biometal science · 2026
    Review
  4. Article
  5. Immunopeptidome Landscape DuringInternational journal of molecular sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Li TanZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Youli LiuZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Yueyang SunZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Sheng LiuZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Zhihua LinZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Qinggang XueZhejiang Key Laboratory of Aquatic Germplasm Resource, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China. qxue@zwu.edu.cn.

Funding

"Bioengineering" first-class discipline student innovation project of Zhejiang province CX2024031Key R&D Program of Ningbo City 2023Z125National Key R&D Program of China 2022YFD2400304National Natural Science Foundation of China 32273110
6 · The paper itself

Abstract

Superoxide dismutases (SODs) are key enzymes involved in oxidative stress regulation. In most eukaryotes, they typically require both copper and zinc for catalysis and structural stability. However, copper-only SODs, previously identified in bacteria and fungi, represent a novel enzyme class with unique catalytic mechanisms. This study investigates copper-only SOD-repeat proteins (CSRPs) in two oyster species, Crassostrea gigas and Crassostrea sikamea, marking the first functional evidence of these proteins as extracellular SODs. Three CSRP genes were identified in each species, with expression localized primarily to the mantle. Structural modeling of a representative protein, Cs-CSRP1, revealed conserved copper-binding sites essential for SOD activity. Functional assays using recombinant Cs-CSRP1 confirmed its SOD activity, supporting its role as a novel extracellular antioxidant enzyme. These findings offer new insights into oyster antioxidant defense mechanisms and the evolution of SOD family proteins.

Indexed as

AntioxidantsCopperCrassostreaSuperoxide DismutaseAmino Acid SequenceAnimalsModels, MolecularOxidative StressPhylogenyAntioxidantsCopperSuperoxide DismutaseCopper-only SOD-repeat proteins (CSRPs)Extracellular antioxidant defenseOystersSuperoxide dismutase

Identifiers

PMID40594389
PMCPMC12217663

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.