Evidence map›Paper›PMID 40593953›Full record

ArticleScientific reports2025

GAINSeq: glaucoma pre-symptomatic detection using machine learning models driven by next-generation sequencing data.

Muhammad Iqbal, Arshad Iqbal, Humaira Ayub, Maqbool Khan, Naveed Ahmad, Yasir Javed, Mohammed Ali Alshara

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Muhammad Iqbal *Sino-Pak Center for Artificial Intelligence (SPCAI), School of Computing Sciences, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology (PAF-IAST), Haripur, 22620, Pakistan.
Arshad Iqbal *Sino-Pak Center for Artificial Intelligence (SPCAI), School of Computing Sciences, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology (PAF-IAST), Haripur, 22620, Pakistan. arshad.iqbal@spcai.paf-iast.edu.pk.
Humaira AyubDepartment of Biological and Health Sciences, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology (PAF-IAST), Haripur, 22620, Pakistan.
Maqbool KhanSino-Pak Center for Artificial Intelligence (SPCAI), School of Computing Sciences, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology (PAF-IAST), Haripur, 22620, Pakistan.
Naveed AhmadCollege of Computer and Information Sciences, Prince Sultan University, 11586, Riyadh, Saudi Arabia.
Yasir JavedCollege of Computer and Information Sciences, Prince Sultan University, 11586, Riyadh, Saudi Arabia.
Mohammed Ali AlsharaCollege of Computer and Information Sciences, Prince Sultan University, 11586, Riyadh, Saudi Arabia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Congenital glaucoma, a complex and diverse condition, presents considerable difficulties in its identification and categorization. This research used Next Generation Sequencing (NGS) whole-exome data to create a categorization framework using machine learning methods. This study specifically investigated the effectiveness of decision tree, random forests, and support vector classification (SVC) algorithms in distinguishing different glaucoma genotypes. Proposed methodology used a range of genomic characteristics, such as percentage variation, PhyloP scores, and Grantham scores, to comprehensively understand the genetic pathways that contribute to the illness. This investigation showed that Decision Tree and Random Forest algorithms consistently performed better than earlier techniques in identifying congenital glaucoma subtypes. These algorithms demonstrated outstanding accuracy and resilience. The findings highlight the capacity of machine learning methods to reveal complex patterns in NGS data, therefore improving the proposed comprehension of the causes of congenital glaucoma. Moreover, the knowledge obtained from this research shows potential for enhancing the accuracy of diagnoses and developing tailored treatment approaches for afflicted people.

Indexed as

GlaucomaHigh-Throughput Nucleotide SequencingMachine LearningAlgorithmsDecision TreesGenotypeHumansAIDeep learningDNAGenomeGlaucomaMachine learning

Identifiers

PMID40593953
PMCPMC12215754

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.