ArticleScientific data2025
PacBio genome assembly of Olea europaea L. subsp. europaea cultivars Frantoio and Leccino.
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed.
- Genome evolution of Mediterranean olives following DNA repeats diversification.The plant genome · 2026Article
- Omics approaches to unveil biotic stress responses in olive: current knowledge and the future.Journal of experimental botany · 2026Review
- Multivariate analysis highlights genetic structure in Olive (Olea Europaea L.) germplasm using Resource-Efficient RAPD marker system.Molecular biology reports · 2026Article
- Genetic and Cyto-Histological Analyses inInternational journal of molecular sciences · 2025Article
- Multi-Omic Advances in Olive Tree (Biology · 2025Review
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We present two high-quality genome assemblies for Olea europaea L. cultivars 'Frantoio' and 'Leccino,' leveraging PacBio HiFi sequencing to achieve approximately 30 × genome coverage for each cultivar. The assemblies span 1.18 Gbp and 1.43 Gbp with contig N50 values of 1.78 Mbp and 45.88 Mbp for 'Frantoio' and 'Leccino,' respectively. BUSCO analysis revealed a great genome completeness (~97.9%), surpassing many of earlier Olea europaea assemblies and is in par with the most recent one. Repetitive content accounted for ~67.5% in 'Frantoio' and ~70.8% in 'Leccino,' with long terminal repeats (LTRs) dominating. Notably, a tandem repeat family, Satellite 1, represented ~16.9% and ~8.6% of the 'Leccino' and 'Frantoio' genomes, respectively. The structural variant (SV) analysis identified cultivar-specific genomic differences, emphasizing the diversity within domesticated olives. This comprehensive analysis provides valuable resources for studying olive genome evolution, domestication, and genetic improvement, underscoring the utility of long-read sequencing for resolving complex genomic features.
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