Evidence map›Paper›PMID 40593802›Full record

ArticleNature communications2025

A Hedgehog-Foxf axis coordinates dental follicle-derived alveolar bone formation.

Mizuki Nagata, Gaurav T Gadhvi, Taishi Komori, Yuki Arai, Chiaki Tsutsumi-Arai, Angel Ka Yan Chu, Seth N Nye, Yuntao Yang, Shion Orikasa, Akira Takahashi and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Stem-cell regulation in periodontium formation and regeneration.Journal of bone and mineral metabolism · 2026
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Mizuki NagataDepartment of Orthodontics, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.
Gaurav T GadhviDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-4379-2824
Taishi KomoriDepartment of Diagnostic & Biomedical Sciences, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.
Yuki AraiDepartment of Orthodontics, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.
Chiaki Tsutsumi-AraiDepartment of Diagnostic & Biomedical Sciences, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.
Angel Ka Yan ChuDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.
Seth N NyeDepartment of Orthodontics and Pediatric Dentistry, University of Michigan School of Dentistry, Ann Arbor, MI, USA.
Yuntao YangMcWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA.
Shion OrikasaDepartment of Diagnostic & Biomedical Sciences, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.ORCID http://orcid.org/0000-0002-4226-7358
Akira TakahashiSchool of Dental Science, Kyushu University, Fukuoka, Japan.
Peter CarlssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Göteborg, Sweden.
W Jim ZhengMcWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA.ORCID http://orcid.org/0000-0001-7411-6047
Joshua D WelchDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.
Noriaki OnoDepartment of Diagnostic & Biomedical Sciences, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA.ORCID http://orcid.org/0000-0002-3771-8230
Wanida OnoDepartment of Orthodontics, University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA. Wanida.Ono@uth.tmc.edu.ORCID http://orcid.org/0000-0002-0358-1897

Funding

Convalescent Plasma to Limit Coronavirus Associated ComplicationsUL1TR003167 · NCATS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KARP, DANIEL D, MCPHERSON, DAVID D · 2019 to 2023
$45.3M
Skeletal stem cell plasticity in craniofacial bone diseases.R35DE034348 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Noriaki Ono · 2024 to 2026
$3.1M
Craniofacial skeletal cell lineage plasticity for reconstituting stem cells and their nichesR01DE030630 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ONO, NORIAKI, ONO, WANIDA · 2021 to 2025
$2.2M
Dynamics and Regulations of Bone Stem Cells in VivoR01DE026666 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ONO, NORIAKI · 2018 to 2022
$2.1M
Pharmacological rescue of tooth eruption disordersR01DE030416 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Wanida Ono · 2023 to 2026
$1.9M
Dental Follicle: A Central Regulator of Tooth Root Formation and RegenerationR01DE029181 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ONO, WANIDA · 2021 to 2025
$1.9M
NCATS NIH HHS UL1 TR003167NIDCR NIH HHS R01 DE026666NIDCR NIH HHS R01 DE029181NIDCR NIH HHS R01 DE030416NIDCR NIH HHS R01 DE030630NIDCR NIH HHS R35 DE034348U.S. Department of Health & Human Services | NIH | National Institute of Dental and Craniofacial Research (NIDCR) R01DE029181U.S. Department of Health & Human Services | NIH | National Institute of Dental and Craniofacial Research (NIDCR) R01DE030416U.S. Department of Health & Human Services | NIH | National Institute of Dental and Craniofacial Research (NIDCR) R01DE030630
6 · The paper itself

Abstract

The alveolar bone is a specialized mineralized structure supporting the lifelong functionality of the tooth in mastication. The alveolar bone develops from the dental follicle (DF) during tooth root formation due to deliberate epithelial-mesenchymal interactions. However, how DF progenitor cell fates are regulated toward alveolar bone osteoblasts remains unknown. We find that Hedgehog signaling activities are transiently activated during the onset of tooth root formation and alveolar bone formation. Parathyroid hormone-related protein (PTHrP)-expressing DF cells are highly responsive to Hedgehog signaling, yet constitutive Hedgehog activation using Pthrp-creER and Ptch1-floxed alleles potently suppresses alveolar osteoblast and ligament differentiation of PTHrP

Indexed as

Alveolar ProcessDental SacForkhead Transcription FactorsHedgehog ProteinsOsteogenesisAnimalsCell DifferentiationMiceOsteoblastsParathyroid Hormone-Related ProteinPatched-1 ReceptorSignal TransductionStem CellsTooth RootForkhead Transcription FactorsHedgehog ProteinsParathyroid Hormone-Related ProteinPatched-1 Receptor

Identifiers

PMID40593802
PMCPMC12219665

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.