Evidence map›Paper›PMID 40593687›Full record

ArticleNature communications2025

The N-degron pathway governs autophagy to promote thermotolerance in Arabidopsis.

Seu Ha Kim, Jun Seok Park, Myoung-Hoon Lee, Joongyu Seo, Jaekwan Kim, Woo Seok Yang, Jihye Park, Kwangmin Yoo, Jungmin Choi, Jong-Bok Seo and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Seu Ha KimDepartment of Life Sciences, Korea University, Seoul, Korea.
Jun Seok ParkDepartment of Life Sciences, Korea University, Seoul, Korea.
Myoung-Hoon LeeDepartment of Life Sciences, Korea University, Seoul, Korea.
Joongyu SeoDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Korea.
Jaekwan KimKorea Basic Science Institute, Seoul Center, Seoul, Korea.
Woo Seok YangDepartment of Life Sciences, Korea University, Seoul, Korea.ORCID http://orcid.org/0000-0002-0022-0295
Jihye ParkDepartment of Life Sciences, Korea University, Seoul, Korea.
Kwangmin YooDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Korea.
Jungmin ChoiDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Korea.ORCID http://orcid.org/0000-0002-8614-0973
Jong-Bok SeoKorea Basic Science Institute, Seoul Center, Seoul, Korea.
Hyun Kyu SongDepartment of Life Sciences, Korea University, Seoul, Korea.ORCID http://orcid.org/0000-0001-5684-4059
Ohkmae K ParkDepartment of Life Sciences, Korea University, Seoul, Korea. omkim@korea.ac.kr.ORCID http://orcid.org/0000-0002-0234-6908

Funding

National Research Foundation of Korea (NRF) RS-2024-00339452
6 · The paper itself

Abstract

Autophagy is a vital process that enables plants to adapt to various environmental changes. During heat stress (HS), misfolded and denatured proteins accumulate in cells, necessitating autophagy for their removal. Here, we show that a core autophagy component ATG8a is targeted for degradation via the Arg/N-degron pathway. ATG8a is expressed as two alternatively spliced transcripts encoding ATG8a isoforms, namely ATG8a(S) and ATG8a(L), with distinct N-termini. While ATG8a(S) remains stable, ATG8a(L) is N-terminally processed to expose the Arg/N-degron, leading to its degradation. Ubiquitin protein ligase E3 component N-recognin 7 (UBR7), identified as an N-recognin, is responsible for ubiquitination and proteasomal degradation of ATG8a(L). Notably, ATG8a(S) and ATG8a(L) show dynamic expression patterns, fluctuating ATG8a levels during the HS and recovery periods. Our findings highlight the crucial role of ATG8a turnover in conferring thermotolerance, which is governed by Arg/N-degron-mediated regulation. Understanding the molecular basis of ATG8a stability will provide valuable insights into plant resilience to HS under changing climatic conditions.

Indexed as

ArabidopsisArabidopsis ProteinsAutophagyAutophagy-Related Protein 8 FamilyThermotoleranceDegronsGene Expression Regulation, PlantHeat-Shock ResponseProteasome Endopeptidase ComplexProteolysisUbiquitinationUbiquitin-Protein LigasesArabidopsis ProteinsATG8 protein, ArabidopsisAutophagy-Related Protein 8 FamilyProteasome Endopeptidase ComplexUbiquitin-Protein Ligases

Identifiers

PMID40593687
PMCPMC12218376

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.