Evidence map›Paper›PMID 40593631›Full record

ArticleNature communications2025

Rational development of FMN-based orthogonal riboswitch that functions in response to specific non-cognate ligand.

Divya Ojha, Ambadas B Rode

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Divya OjhaLaboratory of Synthetic Biology, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone, Faridabad-Gurugram Expressway, Faridabad, Haryana (NCR Delhi), India.
Ambadas B RodeLaboratory of Synthetic Biology, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone, Faridabad-Gurugram Expressway, Faridabad, Haryana (NCR Delhi), India. ab.rode@rcb.res.in.ORCID http://orcid.org/0000-0002-7252-0385

Funding

Department of Biotechnology, Ministry of Science and Technology (DBT) BT/PR45158/DRUG/134/119/2022Department of Biotechnology, Ministry of Science and Technology (DBT) BT/RLF/Re-entry/19/2016DST | Science and Engineering Research Board (SERB) CRG/2022/004570
6 · The paper itself

Abstract

Re-engineering natural riboswitches into orthogonal RNA switches by making them functional in response to exogenous ligands but unresponsive to endogenous cognate ligands is a promising yet less explored strategy for developing gene regulatory tools. Herein, we rationally engineer the aptamer domain of one of the largest and biotechnologically relevant flavin mononucleotide (FMN) riboswitch class, which specifically binds to synthetic ligands with a high binding affinity (K

Indexed as

Aptamers, NucleotideFlavin MononucleotideRiboswitchBinding SitesLigandsNucleic Acid ConformationAptamers, NucleotideFlavin MononucleotideLigandsRiboswitch

Identifiers

PMID40593631
PMCPMC12219259

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.