Evidence map›Paper›PMID 40592942›Full record

ArticleScientific data2025

Chromosome-level genome assembly from a single green slender planthopper Saccharosydne procerus.

Xin-Yang Liu, Zhuo-Qi Liu, Xun Zhou, Ni-Tong Xu, Jie Li, Hai-Jun Xu, Jue-Feng Zhang

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xin-Yang Liu *Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Zhuo-Qi Liu *State Key Laboratory of Rice Biology and Breeding, Institute of Insect Sciences, Zhejiang University, Hangzhou, 310058, China.
Xun Zhou *Annoroad Gene Technology (Beijing) Co., Ltd, Beijing, 100180, China.
Ni-Tong XuState Key Laboratory of Rice Biology and Breeding, Institute of Insect Sciences, Zhejiang University, Hangzhou, 310058, China.
Jie LiState Key Laboratory of Rice Biology and Breeding, Institute of Insect Sciences, Zhejiang University, Hangzhou, 310058, China.
Hai-Jun XuState Key Laboratory of Rice Biology and Breeding, Institute of Insect Sciences, Zhejiang University, Hangzhou, 310058, China. haijunxu@zju.edu.cn.ORCID 0000-0002-7314-377X
Jue-Feng ZhangInstitute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China. zhangjf@zaas.ac.cn.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32272519
6 · The paper itself

Abstract

The green slender planthopper (Saccharosydne procerus) is a significant pest for water bamboo (Zizania latifolia), which is an economically important aquatic vegetable cultivated in East Asia for its edible swollen shoot. Despite its agricultural impact, the molecular basis of S. procerus's ecological adaptations remains poorly understood. To address this gap, we assembled the first reference genome of S. procerus at the chromosomal level using ultra-low input PacBio HiFi libraries and Hi-C sequencing. The genome size is 752.84 Mb, with a contig N50 size of 1.88 Mb and scaffold N50 size of 63.55 Mb. A total of 97.52% of assembled sequences were anchored to 14 pseudo-chromosomes, and BUSCO analysis yielded an Insecta completeness score of 94.8%. A total of 24,349 protein-coding genes were annotated and 310.78 Mb repetitive sequences occupying 41.28% of genome were pinpointed. Our study presents the first high-quality genome assembly of S. procerus, laying the foundation for further studies on its genetic characteristics and pest management.

Indexed as

Chromosomes, InsectGenome, InsectHemipteraAnimals

Identifiers

PMID40592942
PMCPMC12217942

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.