Evidence map›Paper›PMID 40592938›Full record

ArticleScientific reports2025

Conserved stress-responsive genes involved in the early development of Euterpe Edulis.

Layra de Medeiros Cardozo, Francine Alves Nogueira de Almeida, Vinicius Sartori Fioresi, Guilherme Bravim Canal, Liana Hilda Golin Mengarda, Adésio Ferreira, Marcia Flores da Silva Ferreira

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Layra de Medeiros Cardozo *Centro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Francine Alves Nogueira de Almeida *Centro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Vinicius Sartori FioresiCentro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Guilherme Bravim CanalCentro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Liana Hilda Golin MengardaCentro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Adésio FerreiraCentro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil.
Marcia Flores da Silva FerreiraCentro de Ciências Agrárias e Engenharias, Universidade Federal do Espírito Santo, Alto Universitário, S/N, Guararema, Alegre, 29550-000, ES, Brasil. marcia.ferreira@ufes.br.

Funding

Conselho Nacional de Pesquisa 200329/2021-9Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001Fundação de Amparo à Pesquisa do Espírito Santo 483/2021
6 · The paper itself

Abstract

The palm tree Euterpe edulis (juçara) plays a crucial ecological and socioeconomic role in the Atlantic Forest. Its wide distribution suggests the presence of adaptive mechanisms for tolerance to abiotic factors, particularly during early developmental stages, such as water availability and shading. This study aimed to identify conserved and differentially expressed genes (DEGs) involved in the early development of E. edulis, analyzing different tissues and two divergent plant matrices. Using eight RNA-Seq libraries, the strategy was to obtain the first transcriptome for the species through reference mapping against the Elaeis guineensis genome, with focus on conserved genes, followed by differential expression and functional annotation analyses. Among the 32,000 conserved genes identified, 1,133 were differentially expressed, with 11 showing differential expression in both tissues, 678 exclusively in leaves, and 444 in roots. Genes responsive to critical stress factors during early development were identified, revealing matrix-specific environmental adaptations, as well as genes associated with metabolism, light stimuli, and structural development. Leaf tissues exhibited the highest number of exclusive DEGs, indicating greater gene modulation in this tissue. The identification of conserved and highly expressed genes constitutes the first genomic insights for E. edulis, providing a foundation for studies aimed at its management, conservation, and genetic improvement for this non-model and endangered organism.

Indexed as

ArecaceaeGene Expression Regulation, PlantGenes, PlantStress, PhysiologicalGene Expression ProfilingMolecular Sequence AnnotationPlant LeavesPlant ProteinsTranscriptomePlant ProteinsArecaceaeDifferential expressionJuçaraRNA-seqTranscriptome

Identifiers

PMID40592938
PMCPMC12214915

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.