Evidence map›Paper›PMID 40591888›Full record

ArticleThe journal of physical chemistry. B2025

Raquel C R Gonçalves, Sónia C S Pinto, Filipe Teixeira, Efres Belmonte-Reche, Milene Costa da Silva, Juan Gallo, Susana P G Costa, M Manuela M Raposo

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Raquel C R GonçalvesChemistry Centre of the University of Minho, Campus of Gualtar, Braga 4710-057, Portugal.
Sónia C S PintoChemistry Centre of the University of Minho, Campus of Gualtar, Braga 4710-057, Portugal.
Filipe TeixeiraChemistry Centre of the University of Minho, Campus of Gualtar, Braga 4710-057, Portugal.
Efres Belmonte-RecheAdvanced (Magnetic) Theranostic Nanostructures Lab, International Iberian Nanotechnology Laboratory, Av. Mestre José Veiga s/n, Braga 4715-330, Portugal.
Milene Costa da SilvaAdvanced (Magnetic) Theranostic Nanostructures Lab, International Iberian Nanotechnology Laboratory, Av. Mestre José Veiga s/n, Braga 4715-330, Portugal.
Juan GalloAdvanced (Magnetic) Theranostic Nanostructures Lab, International Iberian Nanotechnology Laboratory, Av. Mestre José Veiga s/n, Braga 4715-330, Portugal.ORCID 0000-0002-2028-3234
Susana P G CostaChemistry Centre of the University of Minho, Campus of Gualtar, Braga 4710-057, Portugal.
M Manuela M RaposoChemistry Centre of the University of Minho, Campus of Gualtar, Braga 4710-057, Portugal.ORCID 0000-0002-7996-1626

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fluorescence-based probes are a powerful tool for monitoring living systems in real time with spatiotemporal precision. 3-Difluoroborodipyrromethene (BODIPY) derivatives are widely used as bioimaging probes due to their excellent photophysical properties, high quantum yields, and chemical stability. In this context, we report two BODIPY-based fluorescent probes for visualizing lysosomes and lipid droplets as well as tracking intracellular pH variations within living cells. Computational studies, employing molecular dynamics (MD) simulations and the simplified Tamm-Dancoff approximation (sTDA), were conducted to predict the absorption properties of these derivatives in different chemical environments. These studies accurately reproduced the experimental absorption bands and revealed solvent-dependent spectral shifts, providing insights into the photophysical behavior of the compounds.

Indexed as

Boron CompoundsFluorescent DyesLipid DropletsLysosomesHeLa CellsHumansHydrogen-Ion ConcentrationMolecular Dynamics SimulationOptical Imaging4,4-difluoro-4-bora-3a,4a-diaza-s-indaceneBoron CompoundsFluorescent Dyes

Identifiers

PMID40591888
PMCPMC12818746

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.