Evidence map›Paper›PMID 40588418›Full record

ReviewGenes & development2025

Timing is everything: transcription bursting in development.

Jee Min Kim, Daniel R Larson

Abstract readReview
In one paragraph

Review in Genes & development, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Dynamic Supercoiling Sponsors Transcription Amplification by MYC.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jee Min KimLaboratory of Receptor Biology and Gene Expression, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Daniel R LarsonLaboratory of Receptor Biology and Gene Expression, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA dan.larson@nih.gov.ORCID 0000-0001-9253-3055

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Differential mRNA expression is essential for driving cell type identity and cell fate transitions during tissue differentiation and organismal development. However, transcription kinetics are seemingly heterogeneous at a cell-to-cell level, occurring in a series of episodic bursts of nascent mRNA synthesis separated by refractory periods. This transcriptional bursting therefore affects both the speed and variability of developmental gene expression. Consequently, how transcription kinetics are modulated to control mRNA expression output remains an outstanding question in the field. This review examines recent literature on how these processes are modulated during differentiation and development, the theoretical models of transcription bursting, and the molecular mechanisms underlying transcription kinetics.

Indexed as

Gene Expression Regulation, DevelopmentalTranscription, GeneticAnimalsCell DifferentiationHumansKineticsRNA, MessengerRNA, Messengerdevelopmentgene regulationsingle-celltranscription

Identifiers

PMID40588418
PMCPMC12404199

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.