Evidence map›Paper›PMID 40587820›Full record

ArticleRNA biology2025

Identification and characterization of new structured RNA classes in plants.

Maximilian Sack, Maren Reinhardt, Rica Burgardt, Philipp Berg, Julia Bauer, Andreas Wachter, Zasha Weinberg

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in RNA biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maximilian SackInterdisciplinary Centre for Bioinformatics and Bioinformatics Group, Department of Computer Science, Leipzig University, Leipzig, Germany.ORCID 0009-0005-7014-8224
Maren ReinhardtInstitute for Molecular Physiology (imP), University of Mainz, Mainz, Germany.ORCID 0009-0000-1445-4781
Rica BurgardtInstitute for Molecular Physiology (imP), University of Mainz, Mainz, Germany.ORCID 0009-0008-1022-7862
Philipp BergInstitute for Molecular Physiology (imP), University of Mainz, Mainz, Germany.
Julia BauerInstitute for Molecular Physiology (imP), University of Mainz, Mainz, Germany.ORCID 0009-0001-6497-8564
Andreas WachterInstitute for Molecular Physiology (imP), University of Mainz, Mainz, Germany.
Zasha WeinbergInterdisciplinary Centre for Bioinformatics and Bioinformatics Group, Department of Computer Science, Leipzig University, Leipzig, Germany.ORCID 0000-0002-6681-3624

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing is a very important mechanism to diversify an organism's transcriptome with minimal increases in genome size. It can modify the function of the finished protein or affect its regulation, e.g. induce nonsense-mediated decay (NMD) to degrade the transcript. Mechanisms that affect alternative splicing are therefore of great interest. It has been shown that splicing can be affected by RNA secondary structures within pre-mRNAs. These structured regions of RNA (strucRNA) would affect their transcript in

Indexed as

PlantsRNA, PlantAlternative SplicingGene Expression Regulation, PlantGenome, PlantNonsense Mediated mRNA DecayNucleic Acid ConformationRNA PrecursorsRNA, PlantRNA Precursorsalternative splicingcis-regulationcovariationNon-coding RNAplantsRNA secondary structuresnoRNA

Identifiers

PMID40587820
PMCPMC12218528

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.