Evidence map›Paper›PMID 40586543›Full record

ArticlemSphere2025

Novel lineages of bacteria with reduced genomes from the gut of farm animals.

Shahjahon Begmatov, Alexey V Beletsky, Andrey V Mardanov, Anastasia P Lukina, Liubov B Glukhova, Olga V Karnachuk, Nikolai V Ravin

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSphere, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shahjahon BegmatovInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-3967-9247
Alexey V BeletskyInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Andrey V MardanovInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Anastasia P LukinaTomsk State University, Tomsk, Russia.
Liubov B GlukhovaTomsk State University, Tomsk, Russia.
Olga V KarnachukTomsk State University, Tomsk, Russia.ORCID 0000-0002-1318-2224
Nikolai V RavinInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-1456-1832

Funding

Ministry of Science and Higher Education of the Russian Federation (Minobrnauki of Russia)
6 · The paper itself

Abstract

Genome reduction and associated metabolic deficiencies have been described in various lineages of parasitic and symbiotic microorganisms that obtain essential nutrients from their partners, and in some free-living microorganisms that inhabit stable environments. The animal gut is a relatively stable ecosystem, characterized by an abundance of organic substances and a high concentration of microorganisms, which provides favorable conditions for the survival of microorganisms with reduced genomes. Metagenomic analysis of 49 samples of feces of farm animals (cows, sheep, yaks, and horses) revealed uncultured lineages of bacteria with reduced genomes (<1 Mbp): family UBA1242 (

Indexed as

Animals, DomesticBacteriaGastrointestinal MicrobiomeGenome, BacterialAnimalsCattleFecesHorsesMetagenomicsPhylogenySheepevolutiongut microbiomereduced genome

Identifiers

PMID40586543
PMCPMC12306168

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.