Evidence map›Paper›PMID 40584037›Full record

ArticleFrontiers in microbiology2025

Archaeal LOV domains from Lake Diamante: first functional characterization of a halo-adapted photoreceptor.

Lorena Valle, Yonathan J Coronel, Guillermina E Bravo, Joaquín A Díaz, Virginia Helena Albarracín, María E Farías, Inés Abatedaga

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Reengineering of a flavin-binding fluorescent protein using ProteinMPNN.Protein science : a publication of the Protein Society · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lorena ValleMolecular Photobiology Laboratory, Instituto de Bionanotecnologia del NOA (INBIONATEC), CONICET, Santiago del Estero, Argentina.
Yonathan J CoronelMolecular Photobiology Laboratory, Instituto de Bionanotecnologia del NOA (INBIONATEC), CONICET, Santiago del Estero, Argentina.
Guillermina E BravoFacultad de Agronomía y Agroindustrias (FAyA), Universidad Nacional de Santiago del Estero (UNSE), Santiago del Estero, Argentina.
Joaquín A DíazFacultad de Agronomía y Agroindustrias (FAyA), Universidad Nacional de Santiago del Estero (UNSE), Santiago del Estero, Argentina.
Virginia Helena AlbarracínLaboratorio de Microbiología Ultraestructural y Molecular, Centro Integral de Microscopía Electrónica (CIME), CONICET-Universidad Nacional de Tucumán, Camino de Sirga s/n, Finca El Manantial, San Miguel de Tucumán, Argentina.
María E FaríasPUNABIO S.A. Campus USP-T Av. Solano Vera y Camino a Villa Nougués San Pablo, San Miguel de Tucumán, Argentina.
Inés AbatedagaMolecular Photobiology Laboratory, Instituto de Bionanotecnologia del NOA (INBIONATEC), CONICET, Santiago del Estero, Argentina.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-altitude Andean lakes (HAALs) represent polyextreme environments where diverse photoinduced processes have been documented. In this study, we investigated Light-Oxygen-Voltage (LOV) photoreceptors and identified 28 archaeal sequences from Lake Diamante, which were classified into two major groups (A and B), with three outliers showing unique structural features. Analysis of these sequences and their 3D models revealed hallmark adaptations to halophilic environments, including an abundance of surface acidic residues, an increased prevalence of arginine over lysine, and a greater density of salt bridges. The heterologous expression of a representative LOV domain, ALovD-1, demonstrated conserved photophysics between its dark- and light-adapted states, which was consistent with the slow cycling type. Importantly, ALovD-1 exhibited remarkable halophilic characteristics, maintaining photocycling functionality at salt concentrations as high as 3 M monovalent salts. This ability can be attributed to discrete structural changes, allowing adjustments in flavin interactions within its cavity under varying ionic strengths. Mutational studies of key residues (Y30F and Y48F) highlighted their roles in modulating flavin photophysic and revealed a stabilizing function for Y48 at low salt concentrations. These findings mark the first functional characterization of a canonical archaeal LOV domain, expanding our understanding of light sensing and protein adaptation in extremophiles.

Indexed as

Archaeaextremophilesflavoproteinhalo-adapted proteinLOV photoreceptor

Identifiers

PMID40584037
PMCPMC12202551

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