Evidence map›Paper›PMID 40581599›Full record

ArticleFEMS microbiology ecology2025

Distinct in vitro utilization and degradation of porcine gastric mucin glycans by human intestinal bacteria.

Carol de Ram, Maryse D Berkhout, Carolina O Pandeirada, Jean-Paul Vincken, Guido J E J Hooiveld, Clara Belzer, Henk A Schols

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Carol de RamLaboratory of Food Chemistry, Wageningen University & Research, 6700 AA Wageningen, the Netherlands.ORCID 0009-0004-7554-2442
Maryse D BerkhoutLaboratory of Microbiology, Wageningen University & Research, 6700 EH Wageningen, the Netherlands.ORCID 0000-0003-3765-8853
Carolina O PandeiradaLaboratory of Food Chemistry, Wageningen University & Research, 6700 AA Wageningen, the Netherlands.ORCID 0000-0003-2451-7648
Jean-Paul VinckenLaboratory of Food Chemistry, Wageningen University & Research, 6700 AA Wageningen, the Netherlands.ORCID 0000-0001-8540-4327
Guido J E J HooiveldDivision of Human Nutrition and Health, Wageningen University & Research, 6700 EH Wageningen, the Netherlands.ORCID 0000-0003-1954-3542
Clara BelzerLaboratory of Microbiology, Wageningen University & Research, 6700 EH Wageningen, the Netherlands.ORCID 0000-0001-6922-836X
Henk A ScholsLaboratory of Food Chemistry, Wageningen University & Research, 6700 AA Wageningen, the Netherlands.ORCID 0000-0002-5712-1554

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mucin glycan degradation and utilization by microbes colonizing the human intestine is an essential host-microbe interaction. In this study, degradation and utilization of porcine gastric mucin glycans by Akkermansia muciniphila, Ruminococcus torques, Bacteroides thetaiotaomicron, co-cultures, and a synthetic bacterial community were investigated over time. Liquid chromatography-tandem mass spectrometry O-glycan patterns revealed that all three monocultures removed sialic acid residues. Furthermore, R. torques first targeted fucosylated O-glycans, while A. muciniphila and B. thetaiotaomicron equally favoured fucosylated and non-fucosylated O-glycans. A. muciniphila, R. torques, and B. thetaiotaomicron favoured degradation of first core 2 O-glycan structures relative to core 1 O-glycan structures. Co-cultures, compared to monocultures, demonstrated different O-glycan degradation patterns suggesting distinct ecological interactions between the bacteria. Although extensive O-glycan degradation was observed by the monocultures and co-cultures, only the synthetic community completely degraded all O-glycans within 24 h. Regarding degradation of the constituent N-glycans, matrix-assisted laser desorption ionization-time-of-flight mass spectrometry showed that A. muciniphila and R. torques can partly degrade N-glycans, B. thetaiotaomicron can completely degrade high-mannose N-glycans, and the synthetic community can degrade all N-glycans. The utilization of mucin glycans was observed by production of different metabolites among the bacteria. These results indicate that degradation of mucin glycans depends on microbial interactions and ecological networks.

Indexed as

BacteriaGastric MucinsGastrointestinal MicrobiomeIntestinesPolysaccharidesAkkermansiaAnimalsCoculture TechniquesHumansSwineGastric MucinsPolysaccharidesAkkermansia muciniphilaBacteroides thetaiotaomicronecological interactionshuman gut microbiotamucin glycan degradationRuminococcus torques

Identifiers

PMID40581599
PMCPMC12258148

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.