Evidence map›Paper›PMID 40580963›Full record

ArticleDevelopmental cell2025

A dual enhancer-attenuator element ensures transient Cdx2 expression during mouse posterior body formation.

Irène Amblard, Damir Baranasic, Sheila Q Xie, Benjamin Moyon, Michelle Percharde, Boris Lenhard, Vicki Metzis

Abstract read
In one paragraph

Article in Developmental cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Irène AmblardInstitute of Clinical Sciences, Faculty of Medicine, Imperial College London, London W12 0HS, UK.
Damir BaranasicInstitute of Clinical Sciences, Faculty of Medicine, Imperial College London, London W12 0HS, UK; Medical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK; Division of Electronics, Ruder Boskovic Institute, Bijenicka cesta 54, 10000 Zagreb, Croatia.
Sheila Q XieMedical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK.
Benjamin MoyonMedical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK.
Michelle PerchardeInstitute of Clinical Sciences, Faculty of Medicine, Imperial College London, London W12 0HS, UK; Medical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK.
Boris LenhardInstitute of Clinical Sciences, Faculty of Medicine, Imperial College London, London W12 0HS, UK; Medical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK.
Vicki MetzisInstitute of Clinical Sciences, Faculty of Medicine, Imperial College London, London W12 0HS, UK; Medical Research Council (MRC) Laboratory of Medical Sciences (LMS), London W12 0HS, UK. Electronic address: v.metzis@lms.mrc.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During development, cells express precise gene expression programs to assemble the trunk of the body plan. Appropriate control over the duration of the transcription factor Cdx2 is critical to achieve this outcome, yet how cells control the onset, maintenance, or termination of Cdx2 has remained unclear. Here, we delineate the cis-regulatory logic orchestrating dynamic Cdx2 expression in mouse caudal epiblast progenitors and their derivatives. Combining CRISPR-mediated deletion of regulatory elements with in vitro models and in vivo validation, we demonstrate that distinct enhancers and a repressive element embedded at the Cdx2 locus act sequentially to drive transient Cdx2 expression. We pinpoint an "attenuator": a minimal region relying on a nuclear receptor to extinguish Cdx2. Changing this single motif converts the attenuator to an enhancer with the opposite regulatory behavior. Our findings establish a dual cis-regulatory logic ensuring precise spatiotemporal control over gene expression for vertebrate body patterning.

Indexed as

Body PatterningCDX2 Transcription FactorEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalAnimalsGerm LayersMiceCdx2 protein, mouseCDX2 Transcription FactorattenuatorCDXdirected differentiation of mouse embryonic stem cellsenhancermotif compositionretinoic acid nuclear receptorsilencerspinal cord developmentWNT signaling

Identifiers

PMID40580963
PMCPMC12979250

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.