Evidence map›Paper›PMID 40579666›Full record

ArticleArchives of virology2025

Genome characterization of prunus maculavirus 1 (PrMcV-1), a novel member of the genus maculavirus identified in prunus spp.

Raied Abou Kubaa, Ashrafou Ouro-Djobo, Kristian A Stevens, Olufemi J Alabi, Maher Al Rwahnih

Abstract read
In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Raied Abou KubaaDepartment of Plant Pathology, University of California, Davis, CA, 95616, USA.ORCID http://orcid.org/0000-0001-5611-745X
Ashrafou Ouro-DjoboDepartment of Plant Pathology & Microbiology, Texas A&M AgriLife Research and Extension Center, Weslaco, TX, 78596, USA.
Kristian A StevensFoundation Plant Services, University of California, Davis, CA, 95616, USA.
Olufemi J AlabiDepartment of Plant Pathology & Microbiology, Texas A&M AgriLife Research and Extension Center, Weslaco, TX, 78596, USA.ORCID http://orcid.org/0000-0002-2471-7052
Maher Al RwahnihDepartment of Plant Pathology, University of California, Davis, CA, 95616, USA. malrwahnih@ucdavis.edu.ORCID http://orcid.org/0000-0003-1589-9234

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel virus with a (+)ssRNA genome was identified in a symptomless peach tree by high-throughput sequencing. The complete RACE-verified genome of the virus, tentatively named "Prunus maculavirus 1" (PrMcV-1; GenBank accession number PV231830), is 6,664 nucleotides (nt) long, excluding the poly(A) tail, and contains two open reading frames (ORFs). ORF1 (nt 64-5895) encodes a large replication-associated polyprotein, which contains conserved domains associated with methyltransferase (Mtr), papain-like protease (Pro), helicase (Hel), and RNA-dependent RNA polymerase (RdRp). ORF2 (nt 5571-6478) partially overlaps ORF1 and encodes the capsid protein (CP). Phylogenetic analysis based on both ORFs placed PrMcV-1 in a distinct clade within the genus Maculavirus of the family Tymoviridae. Experimental evidence showed that PrMcV-1 is graft-transmissible. This study expands the known host range of maculaviruses to include Prunus species.

Indexed as

Genome, ViralPlant DiseasesPrunusTymoviridaeHigh-Throughput Nucleotide SequencingOpen Reading FramesPhylogenyRNA, ViralViral ProteinsRNA, ViralViral ProteinsHTSMaculavirusPrMcV-1Prunus spp.

Identifiers

PMID40579666
PMCPMC12204892

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.