Evidence map›Paper›PMID 40569347›Full record

ArticleGenes & genomics2025

NGS-based identification of a MYO7A mutation in a Korean family with DFNB2, a subtype of autosomal recessive non-syndromic hearing loss.

Ye-Ri Kim, Byeonghyeon Lee, Hong-Joon Park, Tae-Jun Kwon, Un-Kyung Kim

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Article in Genes & genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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5 authors.

Ye-Ri Kim *Department of Immunology, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Byeonghyeon Lee *New Drug Development Center, Daegu-Gyeongbuk Medical Innovation Foundation (K-MEDI hub), Daegu, Republic of Korea.
Hong-Joon ParkSoree Ear Clinics, Seoul, Republic of South Korea.
Tae-Jun KwonPreclinical Research Center, Daegu-Gyeongbuk Medical Innovation Foundation (K-MEDI hub), Daegu, Republic of Korea. tjkwon@kmedihub.re.kr.
Un-Kyung KimAdvanced Bio-resource Research Center, Kyungpook National University, Daegu, Republic of Korea. kimuk@knu.ac.kr.

Funding

Kyungpook National University Development Project Research Fund, 2022
6 · The paper itself

Abstract

backgroundHereditary hearing loss (HHL) exhibits considerable genetic heterogeneity. Among the known causative genes, MYO7A is frequently linked to autosomal recessive non-syndromic hearing loss (ARNSHL), contributing to auditory dysfunction through impaired inner ear cellular mechanics.

objectiveThis study aimed to identify the genetic cause of ARNSHL in a Korean family (SR-323) and to assess the pathogenicity of candidate MYO7A variants.

methodsWhole-exome sequencing (WES) was performed on five family members (two affected individuals and three unaffected relatives). Variant filtering, co-segregation analysis, and Sanger sequencing validation were conducted to identify candidate mutations. Conservation analysis across vertebrate species and in silico pathogenicity predictions were used to evaluate the biological impact of the variants. Additionally, 100 unrelated normal-hearing Korean individuals were screened to determine the frequency of the variant in the general population.

resultsTwo MYO7A variants, c.4501G > A (p.Val1501Met) and c.6070 C > T (p.Arg2024Stop), were identified in affected individuals in a compound heterozygous state. Unaffected family members carried only one heterozygous variant. Both amino acid residues were highly conserved across seven vertebrate species. In silico analyses predicted p.Val1501Met to be pathogenic, while c.6070 C > T was previously classified as likely pathogenic. These variants were absent in the normal-hearing cohort, and only individuals with both variants exhibited hearing loss, supporting a compound heterozygous inheritance.

conclusionCompound heterozygosity of the MYO7A variants c.4501G > A and c.6070 C > T likely underlies the ARNSHL phenotype in the SR-323 family. These findings expand the known mutational spectrum of MYO7A and highlight the importance of genetic screening in hereditary hearing loss within the Korean population.

Indexed as

Hearing Loss, SensorineuralMyosinsMyosin VIIaAdultExome SequencingFemaleHigh-Throughput Nucleotide SequencingHumansMaleMutationPedigreeRepublic of KoreaMYO7A protein, humanMyosinsMyosin VIIaCompound heterozygous variantDFNB2Hereditary hearing lossMYO7ANext-generation sequencing

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.