Evidence map›Paper›PMID 40568966›Full record

ArticlePlant & cell physiology2025

Phosphate deficiency reduces nodule formation through a phosphate starvation response-like protein in Phaseolus vulgaris.

Jawahar Singh, Ana Belén Mendoza-Soto, Manish Tiwari, Tomas Tonaltsintle Acevedo-Sandoval, Damien Formey, Jean-Michel Ané, Mariel C Isidra-Arellano, Oswaldo Valdés-López

Abstract read
In one paragraph

Article in Plant & cell physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Structure-informed engineering of plant-microbe interactions.The Plant journal : for cell and molecular biology · 2026
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Jawahar SinghLaboratorio de Genómica Funcional de Leguminosas, Departamento de Biología, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla 54090, Mexico.
Ana Belén Mendoza-SotoLaboratorio de Genómica Funcional de Leguminosas, Departamento de Biología, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla 54090, Mexico.
Manish TiwariDepartment of Bacteriology, University of Wisconsin, Microbial Science Building, 1550 Linden Drive, Madison, WI 53706, USA.
Tomas Tonaltsintle Acevedo-SandovalLaboratorio de Genómica Funcional de Leguminosas, Departamento de Biología, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla 54090, Mexico.
Damien FormeyCentro de Ciencias Genómicas, Programa de Genómica Funcional de Eucariotes, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.
Jean-Michel AnéDepartment of Bacteriology, University of Wisconsin, Microbial Science Building, 1550 Linden Drive, Madison, WI 53706, USA.ORCID 0000-0001-7991-3977
Mariel C Isidra-ArellanoLaboratorio de Genómica Funcional de Leguminosas, Departamento de Biología, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla 54090, Mexico.
Oswaldo Valdés-LópezLaboratorio de Genómica Funcional de Leguminosas, Departamento de Biología, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla 54090, Mexico.ORCID 0000-0002-4760-048X

Funding

Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica DU200225Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica IN200523Secretaría de Ciencia, Humanidades, Tecnología e Innovación 336932UNAM Postdoctoral Program
6 · The paper itself

Abstract

Phosphate deficiency reduces nodule formation in various legumes, which hinders nitrogen fixation and crop yield. We previously showed that phosphate deficiency reduces nodule formation by activating the autoregulation of nodulation (AON) pathway. We also observed that some genetic components of the AON pathway contain Phosphate Starvation Response 1 binding site cis-regulatory elements in their promoter regions, which are recognized by the Phosphate Starvation Response 1 transcription factor. This evidence led us to hypothesize that host plant phosphate levels regulate the expression of genes essential for forming nodules through a PHR-Like protein. In the present study, we provide evidence supporting the participation of PvPHR-Like 7 (PvPHR-L7) in regulating nodule formation in Phaseolus vulgaris. Modulation of PvPHR-L7's expression by RNA interference and overexpression suggested that this transcription factor may control the expression of crucial symbiotic genes involved in nodule development in P. vulgaris. An RT-qPCR analysis revealed that the expression of PvPHR-L7, PvNIN, and PvTML is regulated in accordingly to the plant host Pi levels. Transactivation assays in Nicotiana benthamiana and P. vulgaris transgenic roots indicate that PvPHR-L7 can upregulate the expression of PvNIN and PvTML in the absence of rhizobia. In contrast, PvPHR-L7 downregulates the expression of PvNIN under symbiotic conditions with rhizobia. The data presented shed light on the potential role that PvPHR-L7 plays in the root nodule symbiosis.

Indexed as

PhaseolusPhosphatesPlant ProteinsRoot Nodules, PlantGene Expression Regulation, PlantNicotianaPlant Root NodulationPlants, Genetically ModifiedPromoter Regions, GeneticTranscription FactorsPhosphatesPlant ProteinsTranscription Factorsautoregulation of nodulationnodulation autoregulation receptor kinasenodule inceptionroot nodule symbiosisToo Much Lovetranscription factors

Identifiers

PMID40568966
PMCPMC12739106

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.