Evidence map›Paper›PMID 40568107›Full record

ArticlebioRxiv : the preprint server for biology2025

"Paraxenoviridae", a putative family of ubiquitous marine bacteriophages with double-stranded RNA genomes.

Mitsuhiro Yoshida, Sofia Medvedeva, Akihito Fukudome, Yuri I Wolf, Syun-Ichi Urayama, Yosuke Nishimura, Yoshihiro Takaki, Eugene V Koonin, Mart Krupovic, Takuro Nunoura

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Mitsuhiro YoshidaDeep-Sea Bioresource Research Group, Research Center for Bioscience and Nanoscience, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.ORCID 0000-0002-1834-2477
Sofia MedvedevaInstitut Pasteur, Université Paris Cité, CNRS UMR6047, Archaeal Virology Unit, Paris, France.
Akihito FukudomeHoward Hughes Medical Institute, Department of Biology and Department of Molecular and Cellular Biochemistry, Indiana University, Bloomington, IN, USA.ORCID 0000-0001-8924-1035
Yuri I WolfComputational Biology Branch, Division of Intramural Research, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-0247-8708
Syun-Ichi UrayamaDepartment of Life and Environmental Sciences, Laboratory of Fungal Interaction and Molecular Biology, University of Tsukuba, Tsukuba, Japan.ORCID 0000-0001-5318-9212
Yosuke NishimuraDeep-Sea Bioresource Research Group, Research Center for Bioscience and Nanoscience, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.ORCID 0000-0002-8028-3228
Yoshihiro TakakiInstitute for Extra-cutting-edge Science and Technology Avant-garde Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.ORCID 0000-0002-1247-4946
Eugene V KooninComputational Biology Branch, Division of Intramural Research, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0003-3943-8299
Mart KrupovicInstitut Pasteur, Université Paris Cité, CNRS UMR6047, Archaeal Virology Unit, Paris, France.ORCID 0000-0001-5486-0098
Takuro NunouraDeep-Sea Bioresource Research Group, Research Center for Bioscience and Nanoscience, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.ORCID 0000-0003-2323-0880

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fragmented and primer Ligated DsRNA Sequencing (FLDS) was used to reconstruct five complete, bisegmented RNA genomes of paraxenoviruses, a group of viruses that was previously identified in the ocean and that based on the analysis of partial genomes was proposed to represent a putative new phylum within the kingdom

Indexed as

bacteriophagesdsRNA sequencingmarine RNA virusmetatranscriptomevirus evolution

Identifiers

PMID40568107
PMCPMC12190744

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.