Evidence map›Paper›PMID 40564930›Full record

ArticleInternational journal of molecular sciences2025

Proteomic Analysis of ARID1A-Deficient Ovarian Clear Cell Carcinoma Cells Reveals Differential Mitochondria ETC Subunit Abundances and Targetable Mitochondrial Pathways.

Jesenia M Perez, Joohyun Ryu, Hannah Khan, Mihir Shetty, Emma Parker, Padraig D'Arcy, Shijia Zhu, Martina Bazzaro, Stefani N Thomas

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jesenia M PerezMicrobiology, Immunology, and Cancer Biology Graduate Program, University of Minnesota School of Medicine, Minneapolis, MN 55455, USA.ORCID 0000-0002-1566-530X
Joohyun RyuDepartment of Laboratory Medicine and Pathology, University of Minnesota School of Medicine, Minneapolis, MN 55455, USA.
Hannah KhanMasonic Cancer Center and Department of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, MN 55455, USA.
Mihir ShettyMasonic Cancer Center and Department of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, MN 55455, USA.ORCID 0000-0002-9812-0515
Emma ParkerSchool of Biological, Health and Sports Sciences, Technological University Dublin, D07 EWV4 Dublin, Ireland.ORCID 0009-0003-0295-9821
Padraig D'ArcyDepartment of Biomedical and Clinical Sciences (BKV), Linköping University, 58183 Linköping, Sweden.ORCID 0000-0001-6671-7600
Shijia ZhuDepartment of Laboratory Medicine and Pathology, University of Minnesota School of Medicine, Minneapolis, MN 55455, USA.
Martina BazzaroMasonic Cancer Center and Department of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, MN 55455, USA.
Stefani N ThomasDepartment of Laboratory Medicine and Pathology, University of Minnesota School of Medicine, Minneapolis, MN 55455, USA.ORCID 0000-0003-1679-5453

Funding

TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Characterize the metabolic landscape of ARID1A-mutated ovarian cancerR21CA287351 · NCI · UNIVERSITY OF MINNESOTA · PI Martina Bazzaro, Stefani Thomas · 2025 to 2026
$388k
American Cancer Society 129819-IRG-21-049-61-IRG137Masonic Cancer Center Women's Cancer Research Award 2023Minnesota Ovarian Cancer Alliance Jane Levin and Judy Reisman Research Award 2022NCI NIH HHS R21 CA287351NCI NIH HHS T32 CA009138NIH HHS 1R21CA287351-01NIH HHS 1T32CA009138-50Randy Shaver Community Fund
6 · The paper itself

Abstract

ARID1A-deficient ovarian clear cell carcinoma is a highly lethal gynecologic cancer that depends heavily on mitochondrial respiration. Our biochemical and proteomic analyses reveal that ARID1A knockout cells exhibit marked upregulation of specific subunits within mitochondrial electron transport chain (ETC) Complexes I, III, and IV. However, this upregulation does not directly translate into increased sensitivity to broad-spectrum inhibitors targeting these complexes. These findings suggest that broad-spectrum mitochondrial inhibitors may not be effective therapeutic options for ARID1A-deficient cancers. Instead, the selective inhibition of specific ETC subunits may offer a more promising approach to exploit the metabolic vulnerabilities of ARID1A-deficient cells.

Indexed as

Adenocarcinoma, Clear CellDNA-Binding ProteinsElectron Transport Chain Complex ProteinsMitochondriaOvarian NeoplasmsProteomicsTranscription FactorsCell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansARID1A protein, humanDNA-Binding ProteinsElectron Transport Chain Complex ProteinsTranscription FactorsARID1Aelectron transport chainmitochondriaovarian clear cell carcinomaproteomics

Identifiers

PMID40564930
PMCPMC12193532

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.