Evidence map›Paper›PMID 40562743›Full record

ArticleNature communications2025

Iron regulatory pathways differentially expressed during Madurella mycetomatis grain development in Galleria mellonella.

Imad Abugessaisa, Mickey Konings, Ri-Ichiroh Manabe, Cathal M Murphy, Tsugumi Kawashima, Akira Hasegawa, Chitose Takahashi, Michihira Tagami, Yasushi Okazaki, Kimberly Eadie and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Mycetoma.PLoS neglected tropical diseases · 2026
    Review
  2. Regenerative therapy · 2026
    Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Imad Abugessaisa *Laboratory for Large-Scale Biomedical Data Technology, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan. imad.abugessaisa@a.riken.jp.ORCID http://orcid.org/0000-0001-7458-801X
Mickey Konings *Department of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.ORCID http://orcid.org/0000-0003-3983-4304
Ri-Ichiroh ManabeLaboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Cathal M MurphyDepartment of Biology, Maynooth University, Maynooth, Kildare, Ireland.ORCID http://orcid.org/0009-0007-0446-2383
Tsugumi KawashimaLaboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Akira HasegawaLaboratory for Large-Scale Biomedical Data Technology, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Chitose TakahashiLaboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.ORCID http://orcid.org/0009-0004-4660-9839
Michihira TagamiLaboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Yasushi OkazakiLaboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.ORCID http://orcid.org/0000-0003-3241-5502
Kimberly EadieDepartment of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.ORCID http://orcid.org/0009-0001-0436-7008
Wilson LimDepartment of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.ORCID http://orcid.org/0000-0002-7883-3825
Sean DoyleDepartment of Biology, Maynooth University, Maynooth, Kildare, Ireland.ORCID http://orcid.org/0000-0003-1679-3247
Annelies VerbonDepartment of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Ahmed H FahalMycetoma Research Center, University of Khartoum, Khartoum, Sudan.
Takeya KasukawaLaboratory for Large-Scale Biomedical Data Technology, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.ORCID http://orcid.org/0000-0001-5085-0802
Wendy W J van de SandeDepartment of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands. w.vandesande@erasmusmc.nl.ORCID http://orcid.org/0000-0002-8652-8783

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycetoma is a chronic granulomatous infection of the subcutaneous tissue, most often caused by the fungal pathogen Madurella mycetomatis. Characteristic of the infection is the formation of grains. However, knowledge of the function and formation of the grain is limited. Here, we use a Galleria mellonella larvae infection model and transcriptomic profiling to identify processes associated with M. mycetomatis grain formation. Larvae were infected with M. mycetomatis and, after 4, 24, 72 and 168 h post-inoculation, RNA was extracted from larval content and sequenced. We found that 3498 G. mellonella and 136 M. mycetomatis genes were differentially expressed during infection. In particular, genes encoding proteins related to iron transport were highly expressed by both G. mellonella (transferrin and ferritin) and M. mycetomatis (SidA, SidD and SidI). LC-MS/MS analysis of M. mycetomatis cultured under iron-limiting conditions revealed the presence of SidA and SidD orthologs, and concurrent RP-HPLC and LC-MS identified a singly charged, putative siderophore in culture supernatant. Furthermore, we show that M. mycetomatis can obtain iron from holoferritin. Thus, our results highlight the importance of iron acquisition pathways during grain formation, suggesting potential avenues for development of new diagnostic and therapeutic strategies for mycetoma.

Indexed as

IronMadurellaMothsMycetomaAnimalsFerritinsFungal ProteinsGene Expression ProfilingGene Expression Regulation, FungalLarvaTandem Mass SpectrometryTranscriptomeTransferrinFerritinsFungal ProteinsIronTransferrin

Identifiers

PMID40562743
PMCPMC12198395

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.