Evidence map›Paper›PMID 40560959›Full record

ArticlePloS one2025

Computer-aided discovery of dual-target compounds for Alzheimer's from ayurvedic medicinal plants.

Mohibullah Shah, Sadia Pervaiz, Iqra Ahmad, Shahid Habib Ansari, Valdir Ferreira De Paula Junior, Sibtain Ahmed, Muhammed Umer Khan, Khaled Fahmi Fawy, Umar Nishan, Hanna Dib and 1 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mohibullah ShahDepartment of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan.ORCID 0000-0001-6126-7102
Sadia PervaizDepartment of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan.
Iqra AhmadDepartment of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan.
Shahid Habib AnsariDepartment of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan.
Valdir Ferreira De Paula JuniorFaculty of Veterinary Medicine, Postgraduate Program in Veterinary Sciences, State University of Ceara, Fortaleza, Brazil.
Sibtain AhmedDepartment of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan.ORCID 0000-0003-0708-3278
Muhammed Umer KhanInstitute of Molecular Biology and Biotechnology, The University of Lahore, Lahore, Pakistan.
Khaled Fahmi FawyChemistry Department, Faculty of Science, King Khalid University, Abha, Saudi Arabia.
Umar NishanDepartment of Chemistry, Kohat University of Science & Technology, Kohat, Pakistan.ORCID 0000-0002-0106-3068
Hanna DibCollege of Engineering and Technology, American University of the Middle East, Kuwait.
Mohamed A O AbdelfattahCollege of Engineering and Technology, American University of the Middle East, Kuwait.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alzheimer's disease (AD) is a neurodegenerative disorder characterized by cognitive decline, driven by the accumulation of amyloid-beta plaques and neurofibrillary tangles. It involves the dysfunction of key enzymes such as Acetylcholinesterase (AChE) and β-secretase (BACE1), making them critical targets for therapeutic intervention. In this study we investigated an in-house library of 820 secondary metabolites obtained from Ayurvedic plants against AChE and BACE1 with the aim to discover novel leads for AD. Virtual screening resulted in 15 ligands, mostly belonging to the ursane-type or dammarene-type triterpene saponins of Centella asiatica, reestablishing the potency of this plant in drug discovery against AD. The binding affinities were further verified by molecular dynamics (MD) simulation trajectories, including root mean square fluctuations (RMSF), root mean square deviation (RMSD), hydrogen bonding analysis, Coulomb interaction calculation, Lennard-Jones interactions, and the total interaction energy. Moreover, extensive Principal Component Analysis (PCA) and Gibbs free energy landscape were performed. Our results demonstrated three compounds, namely (S)-eriodictyol 7-O-(6-β-O-trans-p-coumaroyl)-β-d-glucopyranoside, sitoindoside-X and 1,5-di-o-caffeoyl quinic acid as more effective in treating AD due to their comparable drug-like properties. Drug-likeness, structural chemistry, pharmacophore, and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) analysis support their potential for future drug development. To establish the effectiveness of these lead compounds against AD, additional experimental testing should be performed.

Indexed as

Alzheimer DiseaseCholinesterase InhibitorsDrug DiscoveryMedicine, AyurvedicPlants, MedicinalAcetylcholinesteraseAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesHumansHydrogen BondingMolecular Docking SimulationMolecular Dynamics SimulationPrincipal Component AnalysisTriterpenesAcetylcholinesteraseAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBACE1 protein, humanCholinesterase InhibitorsTriterpenes

Identifiers

PMID40560959
PMCPMC12193798

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.