Evidence map›Paper›PMID 40560156›Full record

ArticleMicrobial genomics2025

High-throughput targeted amplicon screening tool for characterizing intrahost diversity in

Tara N Furstenau, Ryann Whealy, Skylar Timm, Alexander Roberts, Sara Maltinsky, Sydney J Wells, Kylie Drake, Ann Ross, Candice Bolduc, Talima Pearson and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Portable Microhaplotype Object and Tools.bioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tara N FurstenauSchool of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA.
Ryann WhealySchool of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA.
Skylar TimmSchool of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA.
Alexander RobertsSchool of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA.
Sara MaltinskyPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Sydney J WellsMobile Dentistry of Arizona, Mesa, AZ, USA.
Kylie DrakePathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Ann RossMobile Dentistry of Arizona, Mesa, AZ, USA.
Candice BolducMobile Dentistry of Arizona, Mesa, AZ, USA.
Talima PearsonPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Viacheslav Y FofanovSchool of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA.

Funding

SSCIMA: Integrating Analysis of Socio-economic Sub-population Dynamics to Improve Spatial Models of Infectious DiseaseU54MD012388 · NIMHD · NORTHERN ARIZONA UNIVERSITY · PI Samantha Jane Sabo · 2017 to 2026
$49.7M
Leptospira prevalence, cycling, and infection in the peridomestic environmentR01AI172924 · NIAID · NORTHERN ARIZONA UNIVERSITY · PI Talima Ross Pearson · 2023 to 2026
$2.8M
Are Minority Health Disparities in MRSA/MSSA Infections Related to Carriage and Social Relationships?R15AI156771 · NIAID · NORTHERN ARIZONA UNIVERSITY · PI PEARSON, TALIMA ROSS · 2021 to 2021
$456k
NIAID NIH HHS R01 AI172924NIAID NIH HHS R15 AI156771NIMHD NIH HHS U54 MD012388
6 · The paper itself

Abstract

A significant proportion of people are asymptomatic carriers of

Indexed as

High-Throughput Nucleotide SequencingHigh-Throughput Screening AssaysStaphylococcal InfectionsStaphylococcus aureusCarrier StateFemaleGenetic VariationGenotypeHumansLongitudinal StudiesMaleMouthWhole Genome Sequencinggenotypingintrahost single nucleotide variantspopulation diversityStaphylococcus aureustargeted amplicon sequencing

Identifiers

PMID40560156
PMCPMC12198441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.