Evidence map›Paper›PMID 40555996›Full record

ArticleEuropean journal of medical research2025

Detection of virulence genes in Helicobacter pylori and its correlation with drug resistance by polymerase chain reaction.

Chang-Jun Men, Shu-Xuan Shan, Zhen-Yi Ou, Hong-Li Fu, Bei Wang, Yue Tong, Qi Gan, Meng Meng, Ri-Mo Xi

Abstract read
In one paragraph

Article in European journal of medical research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chang-Jun Men *Department of Gastroenterology, Tianjin First Central Hospital, 24 Fukang Road, Nankai District, Tianjin, 300192, China. yzxxhkmcj@163.com.
Shu-Xuan Shan *Tianjin First Central Hospital, School of Medicine, Nankai University, Tianjin, 300071, China.
Zhen-Yi OuTianjin First Central Hospital, School of Medicine, Nankai University, Tianjin, 300071, China.
Hong-Li FuState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China.
Bei WangState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China.
Yue TongState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China.
Qi GanState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China.
Meng MengState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China.
Ri-Mo XiState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy and KLMDASR of Tianjin, Nankai University, Tianjin, 300350, China. xirimo@nankai.edu.cn.

Funding

International Science and Technology Cooperation Programme No. 2015DFR40460
6 · The paper itself

Abstract

objectivesThis article aimed to investigate the virulence gene profile of Helicobacter pylori (H. pylori) clinical isolates and explore potential correlations between virulence genes and antimicrobial resistance.

methodsFifty-six H. pylori strains isolated from gastric biopsy specimens were confirmed through biochemical identification (rapid urease test, oxidase test, and urease biochemical reaction). Virulence genes were detected using polymerase chain reaction (PCR). Antimicrobial susceptibility testing against amoxicillin, clarithromycin, levofloxacin, tetracycline, rifampicin, and methicillin was performed via Etest for 41 selected isolates from the original cohort.

resultsAmong Tianjin isolates, oipA and luxS gene demonstrated the highest detection rates (96.43% each). The vacA exhibited vacAs1 (89.29%) and vacAm2 (91.07%) as predominant allelic variants. In contrast, babA2 showed the lowest positivity rate (7.14%), followed by cagA (14.29%). Co-occurrence analysis revealed vacAs1 and luxS gene co-expression in 48 isolates (85.71%), with 96.43% of gastritis patients showing concurrent oipA and luxS gene positivity. Etest results demonstrated no statistically significant association between virulence gene profiles and antibiotic resistance (P > 0.05).

conclusionsIn this study provides valuable data and insights into the virulence genes and antibiotic resistance of Helicobacter pylori strains isolated from Tianjin, China, to identify potential virulence gene-related biomarkers.

Indexed as

Drug Resistance, BacterialHelicobacter InfectionsHelicobacter pyloriVirulence FactorsAdultAnti-Bacterial AgentsBacterial ProteinsFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedPolymerase Chain ReactionVirulenceAnti-Bacterial AgentsBacterial ProteinsVirulence FactorsDrug resistanceEtestHelicobacter pyloriPolymerase chain reactionVirulence genes

Identifiers

PMID40555996
PMCPMC12186420

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.