Evidence map›Paper›PMID 40554544›Full record

ArticlePloS one2025

Identification of key genes associated with anthracnose resistance in Camellia sinensis.

Li-Yi Xu, Jing-Jing Su, Cheng-Kang Zhang, Min Hao, Zi-Wei Zhou, Xiao-Hui Chen, Shi-Zhong Zheng

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Li-Yi XuCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.ORCID 0000-0003-4868-626X
Jing-Jing SuCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.
Cheng-Kang ZhangCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.
Min HaoCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.
Zi-Wei ZhouCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.
Xiao-Hui ChenCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.
Shi-Zhong ZhengCollege of Biological Science and Engineering, Ningde Normal University, Ningde, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthracnose, a prevalent fungal disease in tea plantations, cause substantial economic losses in tea production. Identifying resistance-associated genes in tea plants is crucial for developing anthracnose-resistant cultivars. This study used eight tea samples with differential anthracnose resistance for phenotypic evaluation, weighted gene co-expression network analysis (WGCNA) of RNA-seq data, WGCNA- QTL co-localization to identify resistance gene, and qRT-PCR validation of candidate genes. in vitro pathogen inoculation assay revealed that the lesion diameters of the eight samples ranged from 1.45 mm to 4.5 mm (ANOVA p = 4.4[Formula: see text]). Using the 'Longjing 43' reference genome, transcriptome assembly achieved 93.9% gene detection rate (31,509/33,557 genes). WGCNA categorized expressed genes into 30 modules with the purple module (containing 907 genes) showing positive trait correlation and the yellow-green module (containing 781 genes) exhibiting negative correlation. Integration of WGCNA and QTL mapping identified two high-confidence candidate genes within LG08 QTL intervals. Both genes exhibited significant upregulation (t-test p < 0.01) in tea plant leaves following Colletotrichum spore inoculation. These findings provide actionable genetic targets for marker-assisted breeding of anthracnose-resistant tea cultivars.

Indexed as

Camellia sinensisColletotrichumDisease ResistanceGenes, PlantPlant DiseasesChromosome MappingGene Expression ProfilingGene Expression Regulation, PlantQuantitative Trait Loci

Identifiers

PMID40554544
PMCPMC12186979

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.