Evidence map›Paper›PMID 40552289›Full record

Trial reportFrontiers in immunology2025

A noteworthy issue: microbiome data variation depending on sampling methods in skin microecology studies in acne vulgaris patients.

De-Tian Xu, Qi Chen, Jia-Yi Yang, Guo-Rong Yan, Ling-Lin Zhang, Xiao-Jing Liu, Pei-Ru Wang, Jia Liu, Xiu-Li Wang

Abstract readClinical Trial
In one paragraph

Trial report in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

De-Tian XuShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Qi ChenShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Jia-Yi YangShanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Guo-Rong YanShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Ling-Lin ZhangShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Xiao-Jing LiuShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Pei-Ru WangShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Jia LiuShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.
Xiu-Li WangShanghai Skin Disease Hospital, Tongji University Medical School, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Skin microecology significantly affects health, with the microbiome being a complex community of microorganisms. Different niche preferences of microorganisms raise concerns about the adequacy of common sampling methods like swabbing and cyanoacrylate biopsy. In this study, we aim to contribute to a more suitable sampling strategy in acne microbiome studies. Methods: This study involved ten mild to moderate acne patients. Three sampling methods were used: swab sampling (S1), modified standardized skin surface biopsy (S2), and individual comedo extraction (S3). DNA was extracted and sequenced to analyze the microbiome data. Results: There were significant differences in the bacterial and fungal microbiome data obtained by the three different sampling methods. Conclusion: The choice of sampling method significantly impacts microbiome data, highlighting the need for accurate sampling to understand the relationship between the skin microbiome and acne. Standardizing sampling methods in future studies is essential for advancing skin microecology research. Clinical trial registration: http://www.chictr.org.cn, identifier ChiCTR-CPC-17012398.

Indexed as

Acne VulgarisBacteriaMicrobiotaSkinSpecimen HandlingAdultBiopsyFemaleHumansMaleYoung Adultacne vulgariscomedo extractionmicrobiomesampling methodskin microecology

Identifiers

PMID40552289
PMCPMC12183089

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.