Evidence map›Paper›PMID 40552042›Full record

ArticlePeerJ2025

Integrative omics analysis of plant-microbe synergies in petroleum pollution remediation.

Yi-Qian Mu, Jian-Bo Song, Min Zhao, Peng Ren, Han-Yu Liu, Xuan Huang

Abstract read
In one paragraph

Article in PeerJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yi-Qian Mu *National Engineering Laboratory for Exploration and Development of Low Permeability Oil and Gas Fields, Shaanxi, Xi'an, China.
Jian-Bo Song *College of Life Sciences, Northwest University, Shaanxi, Xi'an, China.
Min ZhaoNational Engineering Laboratory for Exploration and Development of Low Permeability Oil and Gas Fields, Shaanxi, Xi'an, China.
Peng RenNational Engineering Laboratory for Exploration and Development of Low Permeability Oil and Gas Fields, Shaanxi, Xi'an, China.
Han-Yu LiuNational Engineering Laboratory for Exploration and Development of Low Permeability Oil and Gas Fields, Shaanxi, Xi'an, China.
Xuan HuangCollege of Life Sciences, Northwest University, Shaanxi, Xi'an, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the petrochemical industry continues to advance, the exacerbation of ecological imbalance and environmental degradation due to petroleum pollution is increasingly pronounced. The synergistic interaction between plants and microorganisms are pivotal in the degradation of petroleum hydrocarbons; however, the underlying degradation mechanisms are not yet fully understood. This study aims to contribute to understanding these mechanisms by employing a multi-omics approach, integrating transcriptomics, 16S rRNA gene sequencing, and metabolomics, to analyze key differential genes, dominant microbial strains, and root-secreted metabolites involved in petroleum hydrocarbon degradation in alfalfa. Our findings revealed that several stress-related genes are upregulated in alfalfa contaminated with petroleum hydrocarbon. Moreover,

Indexed as

Medicago sativaPetroleumPetroleum PollutionSoil PollutantsBiodegradation, EnvironmentalHydrocarbonsMetabolomicsMultiomicsPlant RootsRhizosphereRNA, Ribosomal, 16SSoil MicrobiologyTranscriptomeHydrocarbonsPetroleumRNA, Ribosomal, 16SSoil PollutantsOmics analysisPetroleum hydrocarbonPlant-microbial remediationRhizosphere microorganismSoil

Identifiers

PMID40552042
PMCPMC12184672

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.