Evidence map›Paper›PMID 40545607›Full record

ArticlePlant biotechnology journal2025

LGRPv2: A high-value platform for the advancement of Fabaceae genomics.

Zijian Yu, Tianyu Lei, Xin Yi, Ya'nan Hao, Shengdan Wu, Zejia Xiao, Jiahui Qu, Shiyu Li, Li Wang, Yuxian Li and 6 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Zijian Yu *Department of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.ORCID https://orcid.org/0000-0002-2194-6511
Tianyu Lei *Department of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Xin Yi *State Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, the Chinese Academy of Science, Beijing, China.ORCID https://orcid.org/0000-0003-4240-7039
Ya'nan Hao *Department of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Shengdan Wu *State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Ecology, Lanzhou University, Lanzhou, China.ORCID https://orcid.org/0000-0003-1481-4825
Zejia XiaoDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Jiahui QuDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Shiyu LiDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Li WangDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Yuxian LiDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Lan ZhangDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Yuxin PanDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.ORCID https://orcid.org/0000-0001-8093-9701
Yidan WangDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Lixia GouDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.
Yuannian JiaoState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, the Chinese Academy of Science, Beijing, China.
Jinpeng WangDepartment of Bioinformatics, School of Life Sciences, North China University of Science and Technology, Hefei, Hebei, China.ORCID https://orcid.org/0000-0002-2253-7752

Funding

Central Guiding Local Science and Technology Development Fund Project 246Z2508GHebei Natural Science Foundation C2020209064Hebei Natural Science Foundation C2024209014Hebei Natural Science Foundation H2023209084Key Research Project of North China University of Science and Technology ZD-YG-202313-23National Natural Science Foundation of China 31501333National Natural Science Foundation of China 32170236National Natural Science Foundation of China 32470676
6 · The paper itself

Abstract

Fabaceae, as one of the most diverse angiosperm families, plays a crucial role in maintaining global ecosystems and advancing human civilization. With the rapid accumulation of legume genomes, we developed LGRPv2 (https://fabaceae.cgrpoee.top), an updated version of the Legume Genomics Research Platform. LGRPv2 integrates 414 genomes, covering all published legume genomes and containing our latest deciphered Tamarindus indica genome from early-diverging legumes and three outgroup genomes (Euscaphis pleiosperma, Vitis vinifera, and Platycodon tenuifolia). It features user-friendly interactive interfaces for studying functional annotations, gene duplications, regulatory proteins, N

Indexed as

FabaceaeGenome, PlantGenomicsDatabases, GeneticSyntenyancestral genomeFabaceaegene familygenomic syntenymulti‐omics

Identifiers

PMID40545607
PMCPMC12392946

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.