Evidence map›Paper›PMID 40537448›Full record

ArticleEnvironmental microbiology reports2025

The Coastal Seafloor Microbiota Is Structured by Local Selection of Cosmopolitan Taxa.

Knut Rudi, Tonje Nilsen, Ragnhild Pettersen, Nigel Brian Keeley, Jessica Louise Ray, Sanna Majaneva, Morten Stokkan, Anja Hervik, Inga Leena Angell, Melcy Philip and 3 more

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Knut RudiNorwegian University of Life Sciences, Ås, Norway.ORCID https://orcid.org/0000-0002-7809-3943
Tonje NilsenNorwegian University of Life Sciences, Ås, Norway.
Ragnhild PettersenAkvaplan-Niva, Tromsø, Norway.
Nigel Brian KeeleyInstitute of Marine Research, Tromsø, Norway.
Jessica Louise RayAqua Kompetanse AS, Norway.ORCID https://orcid.org/0000-0002-7305-5737
Sanna MajanevaAkvaplan-Niva, Tromsø, Norway.ORCID https://orcid.org/0000-0002-0183-2314
Morten StokkanStim as, Lofoten, Norway.
Anja HervikAqua Kompetanse AS, Norway.
Inga Leena AngellNorwegian University of Life Sciences, Ås, Norway.
Melcy PhilipNorwegian University of Life Sciences, Ås, Norway.
Julie MartinNorwegian University of Life Sciences, Ås, Norway.
Maud Ødegaard SundtStim as, Lofoten, Norway.
Lars Gustav SnipenNorwegian University of Life Sciences, Ås, Norway.

Funding

Norges Forskningsråd 320076
6 · The paper itself

Abstract

Understanding the assembly processes of the coastal seafloor microbiota is crucial for gaining insights into how ocean ecosystems work. In our study, we addressed the question about how local selection affects the global distribution of coastal seafloor microorganisms. We identified two main clusters of samples by examining the geographical distribution of 356 high-quality prokaryote metagenome-assembled genomes (MAGs) from 94 coastal samples collected along the Norwegian and Icelandic coasts. There was no identifiable correlation between the abundance of MAGs and the geographic distance between them central to the identified clusters (no distance decay). In contrast, noncentral MAGs demonstrate a pronounced distance decay. We also observed significant functional differences between the two sample clusters. One cluster showed enrichment in functions such as dissimilatory nitrate reduction to ammonium (DNRA), acetoclastic methanogenesis, thiosulphate conversion and acetate and butyrate metabolism. The other cluster was enriched in propionate metabolism, nitrite oxidation to nitrate and cobalamin-dependent carbon fixation. These results suggest that localised environmental selection acts on cosmopolitan taxa to shape seafloor microbiota. Our findings therefore profoundly impact the understanding of seafloor ecological processes and their management.

Indexed as

ArchaeaBacteriaMicrobiotaSeawaterEcosystemIcelandMetagenomeNitratesNorwayPhylogenyNitrates

Identifiers

PMID40537448
PMCPMC12178751

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.