Evidence map›Paper›PMID 40535544›Full record

ArticleFrontiers in cellular and infection microbiology2025

Metagenomics reveals unique gut mycobiome biomarkers in major depressive disorder - a non-invasive method.

Xuan Wang, Di Cao, Wei Chen, Jiaxin Sun, Huimin Hu

Abstract read
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Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Xuan Wang *Department of Dermatology, Lianyungang Municipal Oriental Hospital, Lianyungang, China.
Di Cao *Department of Dermatology, The First People's Hospital of Lianyungang, Lianyungang, China.
Wei ChenDepartment of Dermatology, Lianyungang Municipal Oriental Hospital, Lianyungang, China.
Jiaxin SunDepartment of Dermatology, Lianyungang Municipal Oriental Hospital, Lianyungang, China.
Huimin HuDepartment of Dermatology, The Affiliated Huai'an Hospital of Xuzhou Medical University and The Second People's Hospital of Huai'an, Huaian, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: An increasing amount of evidence suggests a potential link between alterations in the intestinal microbiota and the onset of various psychiatric disorders, including depression. Nevertheless, the precise nature of the link between depression and the intestinal microbiota remains largely unknown. A significant proportion of previous research has concentrated on the study of gut bacterial communities, with relatively little attention paid to the link between gut mycobiome and depression. Methods: In this research, we analyzed the composition and differences of intestinal fungal communities between major depressive disorder (MDD) and healthy controls. Subsequently, we constructed a machine learning model using support vector machine-recursive feature elimination to search for potential fungal markers for MDD. Results: Our findings indicated that the composition and beta diversity of intestinal fungal communities were significantly changed in MDD compared to the healthy controls. A total of 22 specific fungal community markers were screened out by machine learning, and the predictive model had promising performance in the prediction of MDD (area under the curve, AUC = 1.000). Additionally, the intestinal fungal communities demonstrated satisfactory performance in the validation cohort, with an AUC of 0.884 (95% CI: 0.7871-0.9476) in the Russian validation cohort, which consisted of 36 patients with MDD and 36 healthy individuals. The AUC for the Wuhan validation cohort was 0.838 (95% CI: 0.7403-0.9102), which included 40 patients with MDD and 42 healthy individuals. Conclusion: To summarize, our research revealed the characterization of intestinal fungal communities in MDD and developed a prediction model based on specific intestinal fungal communities. Although MDD has well-established diagnostic criteria, the strategy based on the model of gut fungal communities may offer predictive biomarkers for MDD.

Indexed as

FungiGastrointestinal MicrobiomeMajor Depressive DisorderMetagenomicsMycobiomeAdultBiomarkersCase-Control StudiesFecesFemaleHumansMachine LearningMaleMiddle AgedSupport Vector MachineBiomarkersbiomarkersgut mycobiomemachine learningmajor depressive disordermetagenome

Identifiers

PMID40535544
PMCPMC12174422

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.