Evidence map›Paper›PMID 40533950›Full record

ArticlePhysical review. E2025

Exact minimax entropy models of large-scale neuronal activity.

Christopher W Lynn, Qiwei Yu, Rich Pang, Stephanie E Palmer, William Bialek

Abstract read
In one paragraph

Article in Physical review. E, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Quantifying the compressibility of the human brain.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Statistical physics of large-scale neural activity with loops.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Christopher W LynnYale University, Department of Physics, Quantitative Biology Institute, and Wu Tsai Institute, New Haven, Connecticut 06520, USA.
Qiwei YuPrinceton University, Lewis-Sigler Institute for Integrative Genomics, Princeton, New Jersey 08544, USA.
Rich PangPrinceton University, Princeton Neuroscience Institute, Princeton, New Jersey 08544, USA.
Stephanie E PalmerUniversity of Chicago, Department of Organismal Biology and Anatomy, Chicago, Illinois 60637, USA.
William BialekPrinceton University, Joseph Henry Laboratories of Physics, Princeton, New Jersey 08544, USA.

Funding

Coarse-graining approaches to networks, learning, and behaviorR01EB026943 · NIBIB · UNIVERSITY OF CHICAGO · PI BIALEK, WILLIAM, PALMER, STEPHANIE E · 2018 to 2020
$1.1M
NIBIB NIH HHS R01 EB026943
6 · The paper itself

Abstract

In the brain, fine-scale correlations combine to produce macroscopic patterns of activity. However, as experiments record from larger and larger populations, we approach a fundamental bottleneck: the number of correlations one would like to include in a model grows larger than the available data. In this undersampled regime, one must focus on a sparse subset of correlations; the optimal choice contains the maximum information about patterns of activity or, equivalently, minimizes the entropy of the inferred maximum entropy model. Applying this "minimax entropy" principle is generally intractable, but here we present an exact and scalable solution for pairwise correlations that combine to form a tree (a network without loops). Applying our method to over 1000 neurons in the mouse hippocampus, we find that the optimal tree of correlations reduces our uncertainty about the population activity by 14% (over 50 times more than a random tree). Despite containing only 0.1% of all pairwise correlations, this minimax entropy model accurately predicts the observed large-scale synchrony in neural activity and becomes even more accurate as the population grows. The inferred Ising model is almost entirely ferromagnetic (with positive interactions) and exhibits signatures of thermodynamic criticality. Together, these results suggest that a large amount of information may be compressed into a small number of correlations between neurons, and provide the tools for identifying the most important correlations in other complex living systems.

Indexed as

EntropyModels, NeurologicalNeuronsAnimalsHippocampusMice

Identifiers

PMID40533950
PMCPMC13494843

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.