Evidence map›Paper›PMID 40531431›Full record

ArticleClinical and experimental medicine2025

Evaluation and verification of MPDZ as a prognostic biomarker for hepatocellular carcinoma through multiple databases.

Jianzhu Luo, Jianhua Liang, Haixiang Xie, Jiaguang Chen, Xiaoqiang Shen, Fuquan Yang, Tianman Li

Abstract read
In one paragraph

Article in Clinical and experimental medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Jianzhu LuoDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China.
Jianhua LiangDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China.
Haixiang XieDepartment of Hepatobiliary Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi Zhuang Autonomous Region, People's Republic of China.
Jiaguang ChenDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China.
Xiaoqiang ShenDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China.
Fuquan YangDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China.
Tianman LiDepartment of Hepatobiliary Surgery, The First People's Hospital of Yulin, No. 495, Education Middle Road, Yulin, 537000, Guangxi Zhuang Autonomous Region, People's Republic of China. litianman@stu.gxmu.edu.cn.

Funding

Hubei Chen Xiaoping Science and Technology Development Foundation CXPJJH124009-004the Open Project of Guangxi Key Laboratory of Enhanced Recovery after Surgery for Gastrointestinal Cancer GXEKL202405
6 · The paper itself

Abstract

The aim of this study was to assess the prognostic value of the multi-PDZ domain protein (MPDZ) in hepatocellular carcinoma (HCC). MPDZ expression in HCC and normal liver tissue samples were analyzed using TCGA-LIHC data and validated in the GSE14520, GSE62232, GSE76427, GSE121248, and GSE136247 datasets. MPDZ's prognostic value in HCC was evaluated based on Kaplan-Meier survival analysis and Cox proportional risk models. The correlation of MPDZ with other prognostic factors was explored by combined survival analysis and stratified survival analysis. The differentially expressed genes between patient groups stratified on the basis of MPDZ levels in TCGA-LIHC were screened using R and functionally annotated by the GO and KEGG pathway analysis by DAVID. Furthermore, gene set enrichment analysis was conducted to determine the basic molecular mechanism of MPDZ in HCC, and the protein-protein interactions, gene-gene interactions, and immune infiltration status of MPDZ was analyzed by STRING, GeneMania, and TIMER. Our findings indicate that MPDZ is downregulated in HCC and portends worse prognosis. Bioinformatics analysis revealed a strong link between MPDZ and liver cancer progression, liver cancer survival, multiple metabolic pathways, and multiple signaling pathways. In addition, our findings indicate that MPDZ expression is associated with several key genes in the ferroptosis pathway and m6A methylation. Finally, immunohistochemical assessment of clinical specimens confirmed low MPDZ protein expression in HCC tissues relative to paraneoplastic tissues. Taken together, MPDZ is a promising biomarker for the diagnosis and prognosis of HCC.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularLiver NeoplasmsComputational BiologyDatabases, GeneticFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateMalePrognosisProtein Interaction MapsBiomarkers, TumorBiomarker5Diagnosis3HCC1MPDZ2Prognosis4

Identifiers

PMID40531431
PMCPMC12176938

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.