Evidence map›Paper›PMID 40526927›Full record

ArticleJournal of medicinal chemistry2025

Structure-Guided Design of a KMT9 Inhibitor Prodrug with Cellular Activity.

Sheng Wang, Nicolas P F Barthes, Sylvia Urban, Viktor I Hazai, Sebastian O Klein, Tabea Pappert, Paul Kümmel, Nicolas Heller, Johannes Bacher, Maximilian Staudt and 16 more

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Sheng WangKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.ORCID 0000-0002-2813-9878
Nicolas P F BarthesInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0000-0002-5102-3056
Sylvia UrbanKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.
Viktor I HazaiInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Sebastian O KleinInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0000-0003-2159-2546
Tabea PappertInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Paul KümmelInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Nicolas HellerInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Johannes BacherInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Maximilian StaudtInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Jan RuprechtInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0009-0003-2949-0250
Ling PengKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.
Manuela SumKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.
Christopher BerlinKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.
Daad SarrafInstitute of Organic Chemistry, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Pierre RegenassInstitute of Organic Chemistry, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Robin WarstatInstitute of Organic Chemistry, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Johannes WalzInstitute of Organic Chemistry, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Pankaj MishraInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Lin ZhangInstitut für Biochemie, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Oliver EinsleInstitut für Biochemie, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.
Stefan GüntherInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0000-0003-3744-189X
Bernhard BreitInstitute of Organic Chemistry, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0000-0002-2514-3898
Eric MetzgerKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.
Manfred JungInstitute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Freiburg 79104, Germany.ORCID 0000-0002-6361-7716
Roland SchüleKlinik für Urologie und Zentrale Klinische Forschung, Klinikum der Albert-Ludwigs-Universität Freiburg, Freiburg 79106, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysine methyltransferase 9 (KMT9), an obligate heterodimer (KMT9α/KMT9β), belongs to the few described Rossmann-fold histone lysine methyltransferases and monomethylates histone H4 at lysine 12 (H4K12me1). KMT9 depletion or inhibition impairs the proliferation of tumors, including prostate, lung, colon, and bladder cancer cells, underscoring its therapeutic potential. Here, we show the development of branched cofactor analogues with a methionine side chain as highly potent KMT9 inhibitors. Through structure-guided design, a basic nitrogen and 4-chlorophenoxy-2-fluorobenzene in the substrate branch contribute most to the high potency and selectivity. Due to the zwitterionic methionine side chain, the inhibitors did not show cellular activity. Importantly, an ethyl ester prodrug

Indexed as

Antineoplastic AgentsDrug DesignEnzyme InhibitorsHistone-Lysine N-MethyltransferaseProdrugsCell Line, TumorCell ProliferationHumansMolecular StructureStructure-Activity RelationshipAntineoplastic AgentsEnzyme InhibitorsHistone-Lysine N-MethyltransferaseProdrugs

Identifiers

PMID40526927
PMCPMC12257510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.