Evidence map›Paper›PMID 40526748›Full record

ArticlePloS one2025

Abies sachalinensis naturally growing at a sedimentary site acquires iron tolerance via detoxicants production, elemental transfer adjustment, and root endophytic Phialocephala bamuru producing siderophores.

Toshikatsu Haruma, Hayato Masuya, Keiko Yamaji, Yosuke Yamamoto, Naoto Nishimoto, Takahiko Arima, Shingo Tomiyama

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Toshikatsu HarumaDepartment of Mushroom Science and Forest Microbiology, Forestry and Forest Products Research Institute, Tsukuba, Ibaraki, Japan.ORCID 0000-0002-6958-8100
Hayato MasuyaDepartment of Mushroom Science and Forest Microbiology, Forestry and Forest Products Research Institute, Tsukuba, Ibaraki, Japan.
Keiko YamajiGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.ORCID 0000-0003-2875-5619
Yosuke YamamotoDivision of Sustainable Resources Engineering, Faculty of Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Naoto NishimotoDivision of Sustainable Resources Engineering, Faculty of Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Takahiko ArimaDivision of Sustainable Resources Engineering, Faculty of Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.ORCID 0000-0001-8814-7522
Shingo TomiyamaDivision of Sustainable Resources Engineering, Faculty of Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.

Funding

KAKENHI 19H01161, 19K20473, 23K17057, 24K03106
6 · The paper itself

Abstract

Abies sachalinensis naturally growing in heavy metal-rich sedimentary sites exhibits heavy metal tolerance. Although root endophytes increase heavy metal tolerance in various plants, their effects on the tolerance in conifers are not focused on. The objective of our study was to clarify the heavy metal tolerance, considering root endophytes. We measured the heavy metal concentrations in root-zone soil, leaves, stems, fine roots along with heavy metal detoxicants. We also isolated root endophytes and identified the endophyte with the highest siderophore production activity for chelating heavy metals. Results showed high Fe accumulation in fine roots, where malic acid, catechin, and condensed tannins detoxify Fe. A lower Fe/Mn ratio in leaves than roots suggests that A. sachalinensis could regulate Fe and Mn transfer to mitigate Fe phytotoxicity in leaves. Among the isolated root endophytes, Phialocephala bamuru exhibited the highest siderophore production, which could detoxify Fe in A. sachalinensis. These results indicated that A. sachalinensis have multiple Fe tolerance: Fe detoxification production and Fe/Mn ratio adjustment. Moreover, interactions with root endophytes like Ph. bamuru producing siderophores could increase the Fe tolerance and facilitate revegetation on soil containing heavy metal like old mine sites by conifers including A. sachalinensis.

Indexed as

AscomycotaEndophytesIronPlant RootsSiderophoresBiodegradation, EnvironmentalMetals, HeavyPlant LeavesSoilIronMetals, HeavySiderophoresSoil

Identifiers

PMID40526748
PMCPMC12173362

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.