ArticleMolecular biology reports2025
The complete chloroplast genome of the halophyte Tripolium pannonicum: first record for the genus.
Article in Molecular biology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
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1 citing paper in PubMed.
- Comparative genomics on chloroplasts of ChineseFrontiers in plant science · 2026Article
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3 authors.
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Abstract
backgroundThe sea aster, Tripolium pannonicum (Jacq.) Dobrocz 1962, the sole species of the genus Tripolium, is an annual halophyte. Native to estuarine and coastal marsh ecosystems, it plays a vital ecological role in maintaining the stability of saline habitats and supports biodiversity. In addition, it holds significant economic value as a biomass resource. Despite its ecological and economic importance, genomic data for T. pannonicum have been lacking. Here, we report the first complete chloroplast genome of T. pannonicum, providing a foundational resource for phylogenetic and ecological studies of halophytic species within the Asteraceae family.
resultsThe assembled chloroplast genome has a total length of 153,075 bp and a GC content of 37.2%. It comprises four distinct subregions: a large single copy (LSC) region of 84,385 bp, a small single copy (SSC) region of 18,028 bp, and two inverted repeats (IRs) of 25,331 bp each. The chloroplast genome encodes 127 genes, including 88 protein-coding genes (PCGs), 34 transfer RNA genes, and 8 ribosomal RNA genes. Phylogenomic analysis using the whole PCGs revealed that the chloroplast genome of T. pannonicum is closely related to members of the genus Aster.
conclusionsThis study provides the first chloroplast genome for the genus Tripolium, addressing a significant gap in genomic data for halophytic members of the Asteraceae. The results enhance our understanding of the phylogenetic placement and evolutionary relationships of T. pannonicum within the tribe Astereae. Beyond taxonomy, the chloroplast genome offers a molecular foundation for species identification, biogeographic research, and the genomic approach for the estimation of population structure. These data are especially relevant in providing molecular tools that can be applied to ecological monitoring and conservation strategies for salt-tolerant plant species threatened by habitat degradation and climate change.
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