Evidence map›Paper›PMID 40525754›Full record

ArticleMolecular carcinogenesis2025

Spatial Transcriptomic Landscape of Canine Oral Squamous Cell Carcinoma.

Stephanie Goldschmidt, Clifford G Tepper, Jack Goon, Maria Soltero-Rivera, Robert Rebhun, Andrew C Birkeland, Xiao-Jing Wang, Ryan R Davis, Stephenie Y Liu, Iris Rivas and 2 more

Abstract read
In one paragraph

Article in Molecular carcinogenesis, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Stephanie GoldschmidtDepartment of Surgical & Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.ORCID 0000-0001-5944-4202
Clifford G TepperDepartment of Biochemistry and Molecular Medicine, School of Medicine, University of California-Davis, Davis, California, USA.
Jack GoonDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis, Davis, California, USA.
Maria Soltero-RiveraDepartment of Surgical & Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.
Robert RebhunDepartment of Surgical & Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.
Andrew C BirkelandDepartment of Otolaryngology-Head and Neck Surgery, School of Medicine, University of California-Davis, Davis, California, USA.
Xiao-Jing WangDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis, Davis, California, USA.ORCID 0000-0001-8695-7361
Ryan R DavisDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis, Davis, California, USA.
Stephenie Y LiuDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis, Davis, California, USA.
Iris RivasDepartment of Surgical & Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.
Brian MurphyDepartment of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.
Natalia VapniarskyDepartment of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California-Davis, Davis, California, USA.

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI KC KENT LLOYD · 2002 to 2026
$84.9M
Treating recurrent HNSCC with radiation and dual TGF-Beta/PD-L1.P50CA261605 · NCI · UNIVERSITY OF COLORADO DENVER · PI LUCIA, M. SCOTT · 2021 to 2025
$10.1M
BLRD VA I01 BX003232BLRD VA IK6 BX005962BLRD VA IK6 BX006039NCI NIH HHS P30 CA093373NCI NIH HHS P50 CA261605
6 · The paper itself

Abstract

Canine oral squamous cell carcinoma (COSCC) is the second most common oral tumor in dogs and the most relevant for comparative human trials as a spontaneous large animal model of disease. Historical genomic work has focused primarily on bulk sequencing. The present study describes the complete transcriptomic landscape of COSCC with spatial distinction between the surface tumor, deep invasive tumor, peritumoral dysplastic epithelium, and tumor microenvironment compared to matched normal oral samples. Each region demonstrated distinct molecular signatures. Genes related to epithelial growth factor (EGFR) and epithelial-mesenchymal transformation (EMT) were upregulated in both peritumoral dysplasia and surface cancer. Additionally, the KRAS gene set, KRT17, and SSP1 were enriched in cancer. We identified five genes that represent dysplastic lesion with high potential for malignant transformation (FZD4, GAS1, HACD2, NOG, and SLC39A6). Also, three genes, SFRP4, FZD1, and IL34 represented a specific signature of the invasive portion of the COSCC that should be explored for prognostic value as a biomarker of malignancy. Lastly, we verified the immunomodulatory tumor microenvironment detecting an increase in macrophages and an abundance of IL-10 secretion. The other predominant leukocytes were T-cells, with CD4+ T-cells being the most prevalent. CD4+ T cells expressed transcripts for both stimulatory (Inducible T-cell Co-Stimulator (ICOS) and inhibitory molecules (CTLA4). The observed high CTLA4 suggests that this inhibitory signal may be preventing a robust antitumor immune response. Taken together, this study identified multiple targets to be explored for biomarkers of malignancy, prediction of tumor behavior, and potential targets for development of novel therapies.

Indexed as

Biomarkers, TumorCarcinoma, Squamous CellDog DiseasesMouth NeoplasmsTranscriptomeAnimalsDogsEpithelial-Mesenchymal TransitionGene Expression ProfilingGene Expression Regulation, NeoplasticTumor MicroenvironmentBiomarkers, Tumorhead and neck squamous cell carcinomaoral canceroral dysplasiaoral squamous cell carcinomatranscriptomics

Identifiers

PMID40525754
PMCPMC12370000

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.