Evidence map›Paper›PMID 40525256›Full record

ArticlePlant biotechnology journal2025

OsDUF2488 acts synergistically with OsPrx1.1, regulates ROS metabolism and promotes dehydration tolerance in rice.

Dipak Gayen, Sunil Kumar, Pragya Barua, Nilesh Vikram Lande, Subhasis Karmakar, Amit K Dey, Saurabh Gayali, Tushar Kanti Maiti, Kutubuddin Ali Molla, Snehal Murumkar and 2 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genome-Wide Identification of the XTH Gene Family inPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dipak GayenBRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Sunil Kumar *BRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Pragya Barua *BRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Nilesh Vikram Lande *BRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Subhasis KarmakarICAR-National Rice Research Institute, Cuttack, India.
Amit K DeyRegional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad, Haryana, India.
Saurabh GayaliBRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Tushar Kanti MaitiRegional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad, Haryana, India.
Kutubuddin Ali MollaICAR-National Rice Research Institute, Cuttack, India.ORCID https://orcid.org/0000-0002-9897-7906
Snehal MurumkarBRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Subhra ChakrabortyBRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
Niranjan ChakrabortyBRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.ORCID https://orcid.org/0000-0002-6564-4734

Funding

BRIC-National Institute of Plant Genome Research, New DelhiDepartment of Biotechnology, Ministry of Science and Technology, India BT/184/NE/TBP/2011Indian National Science Academy
6 · The paper itself

Abstract

Stress-mediated regulation of energy metabolism and its relation to plant adaptation remain largely unknown. Mitochondrial redox potential is greatly influenced by stress-induced reactive oxygen species (ROS); therefore, we mapped the dehydration-induced alterations in the mitochondrial proteome of a resilient rice cultivar, Rasi, generating a proteome map representing the largest inventory of dehydration-responsive mitochondrial proteins from any plant species. Quantitative proteomic analysis led to the identification of an array of dehydration-responsive proteins (DRPs), associated with various cellular functions, conceivably impinging on the molecular mechanism of adaptation. One DRP identified in the mitochondrial proteome was yeast cadmium factor 54 (YCF54-like), also known as DUF (domain of unknown function) and hereafter referred to as OsDUF2488. We demonstrated that OsDUF2488 localises to mitochondria and preferentially interacts with peroxiredoxin, OsPrx1.1. Overexpression of OsDUF2488 in rice caused enhanced tolerance to dehydration and oxidative stress, while CRISPR/Cas9 knockout mutants of OsDUF2488 showed hypersensitivity to dehydration. Upon exposure to dehydration, OsDUF2488 could rescue mitochondrial dysfunction, contributing to increased ATP production in OsDUF2488-overexpressing rice. Coexpression of OsDUF2488 and OsPrx1.1 in yeast demonstrated a mutual effect on enhanced ROS catabolism, suggesting a cross-kingdom adaptive response of OsDUF2488. Our findings suggest that OsDUF2488 acts synergistically with OsPrx1.1 to regulate redox homeostasis and promote stress tolerance in rice.

Indexed as

OryzaPeroxiredoxinsPlant ProteinsReactive Oxygen SpeciesDehydrationGene Expression Regulation, PlantMitochondriaMitochondrial ProteinsOxidative StressProteomeMitochondrial ProteinsPeroxiredoxinsPlant ProteinsProteomeReactive Oxygen Speciesantioxidant defencedehydration toleranceenergy‐converting organellesproteome mapredox homeostasisstress adaptation

Identifiers

PMID40525256
PMCPMC12392968

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.