Evidence map›Paper›PMID 40524223›Full record

ArticlePlant methods2025

Comparative analysis of distinct phenotyping methods for assessing wheat resistance and pathogen virulence among Fusarium species causing head blight disease.

Vahideh Rafiei, Liza DeGenring, Erin M Schwister, James Mitch Elmore, Mukesh Dubey, Magnus Karlsson, Milton T Drott

Abstract read
In one paragraph

Article in Plant methods, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Biological control ofFrontiers in microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vahideh RafieiDepartment of Forest Mycology and Plant Pathology, Uppsala Biocenter, Swedish University of Agricultural Sciences, Box 7026, Uppsala, SE-750 07, Sweden. vahideh.rafiei@slu.se.
Liza DeGenringUSDA-ARS Cereal Disease Laboratory, St. Paul, MN, USA.
Erin M SchwisterUSDA-ARS Cereal Disease Laboratory, St. Paul, MN, USA.
James Mitch ElmoreUSDA-ARS Cereal Disease Laboratory, St. Paul, MN, USA.
Mukesh DubeyDepartment of Forest Mycology and Plant Pathology, Uppsala Biocenter, Swedish University of Agricultural Sciences, Box 7026, Uppsala, SE-750 07, Sweden.
Magnus KarlssonDepartment of Forest Mycology and Plant Pathology, Uppsala Biocenter, Swedish University of Agricultural Sciences, Box 7026, Uppsala, SE-750 07, Sweden.
Milton T DrottUSDA-ARS Cereal Disease Laboratory, St. Paul, MN, USA. Milton.Drott@usda.gov.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Developing disease-resistant crops is a critical strategy for reducing chemical treatments and mitigating plant disease outbreaks, particularly amid global environmental changes. Fusarium head blight (FHB), caused by a complex of Fusarium species, is one of the most devastating cereal diseases, leading to significant economic losses and contamination of grain with harmful mycotoxins that threaten global cereal production and human health. The high variability in virulence within the complex of Fusarium spp and the lack of efficient high-throughput screening methods have impeded the development of resistant cultivars and made large-scale virulence testing labor-intensive and time-consuming. This study evaluates the efficacy of detached leaf, coleoptile, and seedling assays as high-throughput alternatives to the standard head infection assay for assessing the virulence of Fusarium species and differentiating wheat genotypes by resistance or susceptibility. Two near-isogenic wheat lines, one carrying FHB resistance loci and the other without, were used to assess the virulence of four Fusarium species. The seedling and coleoptile assays showed strong concordance with the traditional head infection assay, accurately reflecting differences in disease severity across Fusarium species and between wheat lines. Conversely, the detached leaf assay provided some differentiation among species but was inconsistent in identifying differences between plant genotypes. Across all assays, F. graminearum consistently exhibited the highest virulence, causing severe disease in leaves, stems, seedlings, and heads, while F. poae was the least virulent. Interestingly, F. culmorum and F. avenaceum displayed tissue-specific variability. These findings establish the coleoptile and seedling assays as rapid, high-throughput alternatives for breeding programs, accelerating the identification of FHB-resistant genotypes and reducing the reliance on the labor-intensive head assay.

Indexed as

CerealsFusarium head blightHead infectionHigh-throughput phenotyping

Identifiers

PMID40524223
PMCPMC12168331

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.