Evidence map›Paper›PMID 40522605›Full record

ArticleRice (New York, N.Y.)2025

Leucocalocybe mongolica Fungus Enhances Rice Growth by Reshaping Root Metabolism, and Hormone-Associated Pathways.

Mingzheng Duan, Ming Tao, Fuhan Wei, Honggao Liu, Sirui Han, Jieming Feng, Qiuyue Ran, Xiande Duan, Zhifang He, Shunqiang Yang and 1 more

Abstract read
In one paragraph

Article in Rice (New York, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Frontiers in plant science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mingzheng DuanKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China. duanmingzheng@ztu.edu.cn.
Ming TaoKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Fuhan WeiKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Honggao LiuKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Sirui HanKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Jieming FengKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Qiuyue RanKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Xiande DuanKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Zhifang HeKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China.
Shunqiang YangKey Laboratory of Edible Fungi Resources Innovation Utilization and Cultivation, College of Agronomy and Life Sciences, Zhaotong, 657000, China. ysq6666@163.com.
Muhammad Junaid RaoNational Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A & F University, Hangzhou, 311300, Zhejiang, China. mjr@zafu.edu.cn.

Funding

Basic Research Special Project of Yunnan Provincial Department of Science and Technology 202401AU070077Joint Special Project for Local Universities of Yunnan Provincial Department of Science and Technology 202401BA070001 - 122Natural Science Foundation of Guangxi Province 2022JJB130068Team Project of the "Xingzhao Talent Support Plan" in Zhaotong City- Honggao Liu ZhaodangRencai[2023]No.3Young Talent Project of Talent Support Program for the Development of Yunnan 210604199008271015
6 · The paper itself

Abstract

The fungal species Leucocalocybe mongolica has garnered attention due to its plant growth-promoting capabilities without fertilizers and emerged as a significant subject of research offering promising applications in sustainable agricultural practices. This study investigated the effects of LY9-transformed soil on rice growth and development through physiochemical, phenotypic, transcriptomic, and metabolomic analyses. Soil treated with varying concentrations of LY9 (10%, 30%, and 50%) exhibited significant improvements in nutrient availability compared to untreated controls. Rice plants grown in LY9-transformed soil enhanced phenotypic characteristics, including increased tillering (up to 20.29 tillers vs. 9 in control), greater root length (52.5 cm vs. 42 cm), and elevated chlorophyll content (1.21 mg/g vs. 0.38 mg/g). Transcriptomic analysis revealed significant alterations in genes related to primary and secondary metabolism, with 2,612 upregulated and 3,419 downregulated genes. KEGG pathway analysis highlighted modifications in nitrogen metabolism (24 genes), photosynthesis (41 genes), hormone signaling and tillering (222 genes), and cell wall and amino acids biosynthesis (365 genes). LC-MS/MS metabolomic profiling identified substantial increases in key amino acids, alkaloids, and phytohormones in LY9-treated rice roots. Notably, tryptophan and its derivatives showed more than 2-fold increases, suggesting enhanced auxin biosynthesis potential. The study revealed intricate molecular mechanisms underlying LY9-mediated growth promotion, particularly through modulation of nitrogen metabolism and hormone signaling pathways. These findings demonstrate the potential of LY9 as a sustainable soil amendment for improving rice productivity and provide valuable insights into the molecular basis of plant-fungal interactions in agricultural systems.

Indexed as

Hormone signalingLeucocalocybe mongolicaNitrogen metabolismPhotosynthesisRice growth promotionSustainable agriculture

Identifiers

PMID40522605
PMCPMC12170973

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.