Evidence map›Paper›PMID 40522442›Full record

ArticleTissue engineering and regenerative medicine2025

An Efficient Organoid Cutting Method for Long-Term Culture and High-Throughput Analyses.

Nicholas A Chartrain, Marina V Pryzhkova, Juliana I Candelaria, Kristin H Gilchrist, Philip W Jordan

Abstract read
In one paragraph

Article in Tissue engineering and regenerative medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Organoids for disease modeling and treatment: state-of-the-art.Experimental hematology & oncology · 2026
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicholas A Chartrain *4D Bio3 Center for Biotechnology and Department of Radiology and Bioengineering, Uniformed Services University of the Health Sciences, Bethesda, MD, 20814, USA.
Marina V Pryzhkova *Department of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, 4301 Jones Bridge Rd, Bethesda, MD, USA.
Juliana I CandelariaDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, 4301 Jones Bridge Rd, Bethesda, MD, USA.
Kristin H Gilchrist4D Bio3 Center for Biotechnology and Department of Radiology and Bioengineering, Uniformed Services University of the Health Sciences, Bethesda, MD, 20814, USA.
Philip W JordanDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, 4301 Jones Bridge Rd, Bethesda, MD, USA. philip.jordan@usuhs.edu.ORCID http://orcid.org/0000-0003-4890-2647

Funding

Pluripotent stem cell-derived organoid model of human gonad development, functions, and disordersR01HD114180 · NICHD · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI JORDAN, PHILIP W · 2023 to 2025
$1.7M
Eunice Kennedy Shriver National Institute of Child Health and Human Development R01HD114180NICHD NIH HHS R01 HD114180
6 · The paper itself

Abstract

backgroundHuman organoid models are invaluable for developmental studies, disease modeling, and personalized medicine research. However, long-term maintenance is challenging due to hypoxia and nutrient limitations as organoids grow. Cutting organoids improves viability, but current methods have low throughput and are prone to causing culture contamination. This study introduces an efficient organoid cutting method to enhance long-term culture and enable high-throughput analyses.

methodsWe employed three-dimensional (3D) printing to fabricate four classes of organoid cutting jigs with blade guides that were compared and optimized for consistent sectioning of human pluripotent stem cell (hPSC)-derived organoids. Organoids were cultured in mini-spin bioreactors and cut every three weeks, beginning on day 35. Organoid health and growth were evaluated by size increase and proliferative marker expression. Additionally, we utilized 3D printed molds to create GelMA or Geltrex-embedded organoid arrays and silicone molds for optimal cutting temperature compound (OCT)-embedding of organoid arrays.

resultsAll 3D printed jigs enabled rapid and uniform organoid cutting under sterile conditions. We determined that a flat-bottom cutting jig design had superior cutting efficiency. Cutting improved nutrient diffusion, increased cell proliferation, and enhanced organoid growth during long-term culture. The mold-based approaches enabled the creation of densely packed organoid arrays and cryosections with evenly distributed organoids.

conclusionThis novel organoid cutting and arraying method overcomes limitations in long-term organoid culture and high-throughput processing. The simplicity of the cutter design and handling make it a versatile tool for diverse types of organoids. By enhancing organoid viability and enabling consistent sample preparation, this approach facilitates improved organ development and disease modeling, drug screening, and high-throughput analyses, including single-cell spatial transcriptomics applications.

Indexed as

Cell Culture TechniquesHigh-Throughput Screening AssaysOrganoidsCell ProliferationHumansPluripotent Stem CellsPrinting, Three-DimensionalBioengineeringHigh-throughputHuman pluripotent stem cellsLong-term cultureOrganoid

Identifiers

PMID40522442
PMCPMC12209159

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.