Evidence map›Paper›PMID 40520176›Full record

ArticleFrontiers in pharmacology2025

From genomics to treatment: overcoming pan-drug-resistant

Fernando Pasteran, Juan Manuel De Mendieta, Natalia Pujato, Gina Dotta, Lisandro J González, Mabel Rizzo, Alejandra Fernández, Paola Ceriana, Lucia Maccari, Melina Rapoport and 8 more

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Fernando PasteranServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Juan Manuel De MendietaServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Natalia PujatoInstituto de Trasplante de Alta Complejidad, Buenos Aires, Argentina.
Gina DottaInstituto de Biología Molecular y Celular de Rosario, CONICET, Universidad Nacional de Rosario, Rosario, Argentina.
Lisandro J GonzálezInstituto de Biología Molecular y Celular de Rosario, CONICET, Universidad Nacional de Rosario, Rosario, Argentina.
Mabel RizzoLaboratorio de Microbiología, Hospital Interzonal General de Agudos "Dr. José Penna", Bahía Blanca, Argentina.
Alejandra FernándezLaboratorio de Microbiología "Dr. Rapela", Buenos Aires, Argentina.
Paola CerianaServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Lucia MaccariServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Melina RapoportServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Sonia GómezServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Celeste LuceroServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
María Alejandra MenocalServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Ezequiel AlbornozServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Denise De BelderUnidad Operativa Centro Nacional de Genómica y Bioinformática, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.
Marcelo RadisicInstituto de Trasplante de Alta Complejidad, Buenos Aires, Argentina.
Alejandro J VilaInstituto de Biología Molecular y Celular de Rosario, CONICET, Universidad Nacional de Rosario, Rosario, Argentina.
Alejandra CorsoServicio Antimicrobianos, National Reference Laboratory for Antimicrobial Resistance, Instituto Nacional de Enfermedades Infecciosas, ANLIS "Dr. Carlos Malbrán", Buenos Aires, Argentina.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The spread pan-drug resistant pathogens pose a critical challenge to current therapies, resulting in high mortality and necessitating alternative approaches. Methods: We report pan-drug resistant Klebsiella pneumoniae isolates from five patients in a single hospital, including resistance to cefiderocol and cefepime-zidebactam in one isolate. Results: Whole-genome sequencing identified blaNDM-5 and blaCTX-M-15 genes in all isolates, explaining carbapenemase and extended-spectrum β- lactamase phenotypes, with blaKPC-2 in one isolate. A novel sulfhydryl variable β-lactamase (SHV) variant, blaSHV-231, was present in all isolates under a strong promoter. Two isolates exhibited a non-synonymous mutation in fstI encoding PBP3, the primary target of aztreonam in Gram-negative bacteria. Genomic and phenotypic characterization guided successful compassionate treatment using aztreonam, ceftazidime-avibactam, and amoxicillin-clavulanate at maximum doses. Discussion: Dissection of the roles of the substitutions present in blaSHV-231 revealed that this variant was responsible for the reduced susceptibility to aztreonam-avibactam, at the expense of a higher susceptibility to clavulanate. Targeted therapy can be successful upon dissection of unexpected mechanisms of resistance that enhance the contribution of endemic β-lactamase.

Indexed as

aztreonam-avibactamcefepime-zidebactamcefiderocolemerging pathogensKlebsiella pneumoniaemulti-drug resistanceNDM carbapenemasepan-drug resistance

Identifiers

PMID40520176
PMCPMC12162686

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.