Evidence map›Paper›PMID 40517140›Full record

ArticleNPJ digital medicine2025

A scoping review of self-supervised representation learning for clinical decision making using EHR categorical data.

Yuanyuan Zheng, Adel Bensahla, Mina Bjelogrlic, Jamil Zaghir, Hugues Turbe, Lydie Bednarczyk, Christophe Gaudet-Blavignac, Julien Ehrsam, Stéphane Marchand-Maillet, Christian Lovis

Erratum issuedAbstract read
In one paragraph

Article in NPJ digital medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Yuanyuan Zheng *Division of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Adel Bensahla *Division of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Mina BjelogrlicDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland. mina.bjelogrlic@hug.ch.
Jamil ZaghirDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Hugues TurbeDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Lydie BednarczykDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Christophe Gaudet-BlavignacDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Julien EhrsamDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
Stéphane Marchand-MailletDepartment of Computer Science, University of Geneva, Geneva, Switzerland.
Christian LovisDivision of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The widespread adoption of Electronic Health Records (EHRs) and deep learning, particularly through Self-Supervised Representation Learning (SSRL) for categorical data, has transformed clinical decision-making. This scoping review, following PRISMA-ScR guidelines, examines 46 studies published from January 2019 to April 2024, sourced from PubMed, MEDLINE, Embase, ACM, and Web of Science, focusing on SSRL for unlabeled categorical EHR data. The review systematically assesses research trends in building computationally and data-efficient representations for medical tasks, identifying major trends in model families: Transformer-based (43%), Autoencoder-based (28%), and Graph Neural Network-based (17%) models. The analysis highlights scenarios where healthcare institutions can leverage or develop SSRL technologies. It also addresses current limitations in assessing the impact of these technologies and identifies research opportunities to enhance their influence on clinical practice.

Identifiers

PMID40517140
PMCPMC12167381

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.