Evidence map›Paper›PMID 40514625›Full record

ArticleDiscover oncology2025

Identification of biomarkers associated with exhausted CD8 + T cells in the tumor microenvironment of intrahepatic cholangiocarcinoma based on Mendelian randomization and bioinformatics analysis.

LiuXing Feng, Quan Yuan, Hao Yu, RongJie Ye, ZhenHao Xie, JiaHuan Xu, XiuDong Li, ShuangJia Wang

Abstract read
In one paragraph

Article in Discover oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Diagnostics (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Terminally exhausted CD8Frontiers in immunology · 2025
    Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

LiuXing Feng *Department of Hepato-Biliary-Pancreatic and Vascular Surgery, School of Medicine, The First Affiliated Hospital of Xiamen University, Xiamen University, Xiamen, China.
Quan Yuan *Harbin Medical University Cancer Hospital, Harbin, Heilongjiang, China.
Hao Yu *Department of Hepato-Biliary-Pancreatic and Vascular Surgery, School of Medicine, The First Affiliated Hospital of Xiamen University, Xiamen University, Xiamen, China.
RongJie YeDepartment of Orthopaedics, Quanzhou First Hospital Affiliated to Fujian Medical University, Fujian, China.
ZhenHao XieDepartment of Orthopaedics, Quanzhou First Hospital Affiliated to Fujian Medical University, Fujian, China.
JiaHuan XuDepartment of Basic Medical Sciences, Putian University, Putian, Fujian, China.
XiuDong LiDepartment of Hepato-Biliary-Pancreatic and Vascular Surgery, School of Medicine, The First Affiliated Hospital of Xiamen University, Xiamen University, Xiamen, China. lixiudong126@126.com.
ShuangJia WangDepartment of Hepato-Biliary-Pancreatic and Vascular Surgery, School of Medicine, The First Affiliated Hospital of Xiamen University, Xiamen University, Xiamen, China. abian-03@163.com.

Funding

Natural Science Foundation of Fujian Province 2021J011345
6 · The paper itself

Abstract

Intrahepatic cholangiocarcinoma (iCCA) represents a growing health concern due to its increasing incidence and poor prognosis, highlighting the urgent need for biomarkers and therapeutic targets. This study utilized BayesPrism deconvolution, Weighted Gene Co-expression Network Analysis (WGCNA), and Summary Mendelian Randomization (SMR), integrated with single-cell RNA sequencing (scRNA-seq) data, to analyze the tumor microenvironment. Seven distinct cell subpopulations, including Exhausted CD8 + T cells (Tex), were identified. Notably, scPagwas analysis revealed gene enrichment in UQCRH, HINT1, and AKR1C3, associated with Tex. BayesPrism analysis confirmed their increased presence in the tumor microenvironment, indicating a role in immune evasion. WGCNA identified 594 genes linked to these cells, with PNO1 and AKR1C5P emerging as potential disease-associated genes. These findings highlight the critical role of Tex in immune suppression and identify key genes for further investigation in iCCA progression and treatment strategies.

Indexed as

Exhausted CD8 + T cellsImmunotherapyIntrahepatic cholangiocarcinomaMendelian randomization

Identifiers

PMID40514625
PMCPMC12165911

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.