Evidence map›Paper›PMID 40514353›Full record

ArticleScientific data2025

Chromosome-level genome assembly of cultivated strawberry 'Seolhyang' (Fragaria × ananassa).

Hyeondae Han, Yoon Jeong Jang, Koeun Han, Han-Na Park, Do-Sun Kim, Seonghee Lee, Youngjae Oh

Abstract read
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hyeondae HanVegetable Research Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju, 55365, Korea.ORCID 0000-0002-4657-5016
Yoon Jeong JangVegetable Research Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju, 55365, Korea.
Koeun HanVegetable Research Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju, 55365, Korea.
Han-Na ParkStrawberry Research Institute, Chungcheongnam-do, ARES, Nonsan, 32914, Korea.
Do-Sun KimVegetable Research Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju, 55365, Korea.
Seonghee LeeDepartment of Horticultural Science, University of Florida, IFAS Gulf Coast Research and Education Center, 14625 CR 672, Wimauma, FL, 33598, USA.ORCID 0000-0002-5190-8014
Youngjae OhDepartment of Horticultural Science, Chungbuk National University, Cheongju, 28644, Korea. yoh@cbnu.ac.kr.

Funding

National Research Foundation of Korea (NRF) RS-2024-00355164Rural Development Administration (RDA) RS-2023-00225421
6 · The paper itself

Abstract

Cultivated strawberry (Fragaria × ananassa) belongs to the family Rosaceae and is an allo-octoploid species (2n = 8×  = 56). Using PacBio Revio long reads of 'Seolhyang', we completed telomere-to-telomere phased genome assemblies with a size of 797 Mb with a contig N50 of 27.04 Mb. Benchmarking of the universal single-copy orthologs (BUSCO) analysis detected 99.1% conserved genes in the assembly. In addition, the average long terminal repeat assembly index (LAI) was 17.28, with high genome continuity. In this study, we identified 50 of the possible 56 telomeres across 28 chromosomes. The 'Seolhyang' genome was annotated using RNA-Seq data representing various F. × ananassa tissues from the NCBI sequence read archive, which resulted in 129,184 genes.

Indexed as

Chromosomes, PlantFragariaGenome, PlantTelomereTerminal Repeat Sequences

Identifiers

PMID40514353
PMCPMC12166037

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.