Evidence map›Paper›PMID 40512784›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

The dependence of the amino acid backbone conformation on the translated synonymous codon is not statistically significant.

Javier González-Delgado, Pablo Mier, Pau Bernadó, Pierre Neuvial, Juan Cortés

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Javier González-DelgadoUniversité de Rennes, ENSAI, CNRS, CREST-UMR 9194, Rennes F-35000, France.ORCID 0000-0003-3783-1919
Pablo MierAndalusian Centre for Developmental Biology, Faculty of Experimental Sciences (Genetics Area), Universidad Pablo de Olavide, Seville 41013, Spain.ORCID 0000-0003-3663-2352
Pau BernadóCentre de Biologie Structurale, Université de Montpellier, INSERM and CNRS, Montpellier F-34090, France.ORCID 0000-0001-7395-5922
Pierre NeuvialInstitut de Mathématiques de Toulouse, UMR5219, Université de Toulouse, CNRS, UPS, Toulouse Cedex 9 F-31062, France.ORCID 0000-0003-3584-9998
Juan CortésLAAS-CNRS, Université de Toulouse, CNRS, Toulouse F-31400, France.ORCID 0000-0002-4660-0306

Funding

Agence Nationale de la Recherche (ANR) ANR-22-CE45- 0003
6 · The paper itself

Abstract

The correlation between synonymous codon usage and secondary structure in translated proteins has been widely demonstrated. This usage plays a capital role in tuning translational rates and protein folding kinetics, indirectly influencing multiple biological processes. A recent report [A. A. Rosenberg, A. Marx, A. M. Bronstein,

Indexed as

Amino AcidsCodonProtein BiosynthesisProteinsCodon UsageProtein ConformationProtein FoldingProtein Structure, SecondaryAmino AcidsCodonProteinsangle distributionsprotein structurestatistical testssynonymous codons

Identifiers

PMID40512784
PMCPMC12184513

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.