Evidence map›Paper›PMID 40512661›Full record

ArticleMicrobial genomics2025

Comprehensive genomic analysis of type VI secretion system diversity and associated proteins in

Lili Jiang, Wenjing Yi, Yuzhe Zhao, Ning Zhu, Di Zhao, Zhihan Peng, Lei Song, Tingting Dong, Xin Jiang, Dandan Liu and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. From Environmental Organism to Nosocomial Threat:Antibiotics (Basel, Switzerland) · 2026
    Review
  2. Prevalence and activity of class II microcins inApplied and environmental microbiology · 2026
    Article
  3. Carbapenem-ResistantAntibiotics (Basel, Switzerland) · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Isolation and Genome Analysis ofMicroorganisms · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Lili JiangHealth Examination Center, The First Hospital of Jilin University, Changchun, PR China.
Wenjing YiBioinformatics Laboratory, Center for Infectious Diseases and Pathogen Biology, The First Hospital of Jilin University, Changchun, PR China.
Yuzhe ZhaoDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, PR China.
Ning ZhuBioinformatics Laboratory, Center for Infectious Diseases and Pathogen Biology, The First Hospital of Jilin University, Changchun, PR China.
Di ZhaoHealth Examination Center, The First Hospital of Jilin University, Changchun, PR China.
Zhihan PengBioinformatics Laboratory, Center for Infectious Diseases and Pathogen Biology, The First Hospital of Jilin University, Changchun, PR China.
Lei SongDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, PR China.
Tingting DongDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, PR China.
Xin JiangHealth Examination Center, The First Hospital of Jilin University, Changchun, PR China.
Dandan LiuHealth Examination Center, The First Hospital of Jilin University, Changchun, PR China.
Xufeng JiDepartment of Laboratory Medicine, The First Hospital of Jilin University, Changchun, PR China.
Qingtian GuanBioinformatics Laboratory, Center for Infectious Diseases and Pathogen Biology, The First Hospital of Jilin University, Changchun, PR China.
Hongyu JiangHealth Examination Center, The First Hospital of Jilin University, Changchun, PR China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type VI secretion system (T6SS) is a contact-dependent contractile nanomachine widely distributed among Gram-negative bacteria, essential for interbacterial competition, host interactions and environmental adaptation. The T6SS encoded by

Indexed as

Bacterial ProteinsSerratiaType VI Secretion SystemsComputational BiologyGenetic VariationGenome, BacterialGenomicsPhylogenyBacterial ProteinsType VI Secretion Systemscomparative genomicseffector proteinsSerratia spp.type VI secretion system (T6SS)

Identifiers

PMID40512661
PMCPMC12165300

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.