Evidence map›Paper›PMID 40510864›Full record

ArticleFree neuropathology2025

Applying machine learning to assist in the morphometric assessment of brain arteriolosclerosis through automation.

Jerry J Lou, Peter Chang, Kiana D Nava, Chanon Chantaduly, Hsin-Pei Wang, William H Yong, Viharkumar Patel, Ajinkya J Chaudhari, La Rissa Vasquez, Edwin Monuki and 9 more

Abstract read
In one paragraph

Article in Free neuropathology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Digital neuropathology of neurodegenerative disorders: Foundations, research advances, and future directions.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Jerry J LouDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Irvine, Irvine, USA.
Peter ChangDepartment of Radiological Sciences, Center for Artificial Intelligence in Diagnostic Medicine, School of Medicine, University of California Irvine, Orange, USA.
Kiana D NavaDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Davis, Sacramento, USA.
Chanon ChantadulyDepartment of Radiological Sciences, Center for Artificial Intelligence in Diagnostic Medicine, School of Medicine, University of California Irvine, Orange, USA.
Hsin-Pei WangDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Davis, Sacramento, USA.
William H YongDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Irvine, Irvine, USA.
Viharkumar PatelDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Davis, Sacramento, USA.
Ajinkya J ChaudhariDepartment of Electrical and Computer Engineering, University of California Davis, Davis, USA.
La Rissa VasquezDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Davis, Sacramento, USA.
Edwin MonukiDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Irvine, Irvine, USA.
Elizabeth HeadDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Irvine, Irvine, USA.
Harry V VintersDepartment of Pathology and Laboratory Medicine and Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, USA.
Shino MagakiDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, USA.
Danielle J HarveyDepartment of Public Health Sciences, School of Medicine, University of California Davis, Davis, USA.
Chen-Nee ChuahDepartment of Electrical and Computer Engineering, University of California Davis, Davis, USA.
Charles S DeCarliDepartment of Neurology, School of Medicine, University of California Davis, Sacramento, USA.
Christopher K WilliamsDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, USA.
Michael KeiserDepartment of Pharmaceutical Chemistry, Department of Bioengineering and Therapeutic Sciences, Institute for Neurodegenerative Diseases; Bakar Computational Health Sciences Institute, University of California San Francisco, San Francisco, USA.
Brittany N DuggerDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California Davis, Sacramento, USA.

Funding

UC Davis Alzheimer's Disease Core CenterP30AG010129 · NIA · UNIVERSITY OF CALIFORNIA DAVIS · PI JOHNSON, DAVID K · 1991 to 2020
$28.3M
The Alzheimer's Disease Research Center at the University of California, IrvineP30AG066519 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI Mathew Mark Blurton-Jones · 2020 to 2026
$27.9M
UC Davis Alzheimer's Disease Research CenterP30AG072972 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Charles DeCarli, Rachel A Whitmer · 2021 to 2026
$25.2M
The Neuropathologic Landscape of Alzheimer's Disease in Hispanic DecedentsR01AG062517 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Brittany Nicole Dugger · 2019 to 2026
$10.5M
Brain Digital Slide Archive: An Open Source Platform for data sharing and analysis of digital neuropathologyU24NS133949 · NINDS · EMORY UNIVERSITY · PI Lee Cooper, Brittany Nicole Dugger · 2023 to 2026
$4.3M
Training in Translational ADRD Neuroscience (TITAN)T32AG073088 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI Joshua Grill, Elizabeth Head · 2021 to 2026
$2.2M
NIA NIH HHS P30 AG010129NIA NIH HHS P30 AG066519NIA NIH HHS P30 AG072972NIA NIH HHS R01 AG062517NIA NIH HHS T32 AG073088NINDS NIH HHS U24 NS133949
6 · The paper itself

Abstract

Objective quantification of brain arteriolosclerosis remains an area of ongoing refinement in neuropathology, with current methods primarily utilizing semi-quantitative scales completed through manual histological examination. These approaches offer modest inter-rater reliability and do not provide precise quantitative metrics. To address this gap, we present a prototype end-to-end machine learning (ML)-based algorithm, Arteriolosclerosis Segmentation (ArtSeg), followed by Vascular Morphometry (VasMorph) - to assist persons in the morphometric analysis of arteriolosclerotic vessels on whole slide images (WSIs). We digitized hematoxylin and eosin-stained glass slides (13 participants, total 42 WSIs) of human brain frontal or occipital lobe cortical and/or periventricular white matter collected from three brain banks (University of California, Davis, Irvine, and Los Angeles Alzheimer's Disease Research Centers). ArtSeg comprises three ML models for blood vessel detection, arteriolosclerosis classification, and segmentation of arteriolosclerotic vessel walls and lumens. For blood vessel detection, ArtSeg achieved area under the receiver operating characteristic curve (AUC-ROC) values of 0.79 (internal hold-out testing) and 0.77 (external testing), Dice scores of 0.56 (internal hold-out) and 0.74 (external), and Hausdorff distances of 2.53 (internal hold-out) and 2.15 (external). Arteriolosclerosis classification demonstrated accuracies of 0.94 (mean, 3-fold cross-validation), 0.86 (internal hold-out), and 0.77 (external), alongside AUC-ROC values of 0.69 (mean, 3-fold cross-validation), 0.87 (internal hold-out), and 0.83 (external). For arteriolosclerotic vessel segmentation, ArtSeg yielded Dice scores of 0.68 (mean, 3-fold cross-validation), 0.73 (internal hold-out), and 0.71 (external); Hausdorff distances of 7.63 (mean, 3-fold cross-validation), 6.93 (internal hold-out), and 7.80 (external); and AUC-ROC values of 0.90 (mean, 3-fold cross-validation), 0.92 (internal hold-out), and 0.87 (external). VasMorph successfully derived sclerotic indices, vessel wall thicknesses, and vessel wall to lumen area ratios from ArtSeg-segmented vessels, producing results comparable to expert assessment. This integrated approach shows promise as an assistive tool to enhance current neuropathological evaluation of brain arteriolosclerosis, offering potential for improved inter-rater reliability and quantification.

Indexed as

ArteriolosclerosisArtificial intelligenceBlood vesselMachine learningMorphometryNeuropathology

Identifiers

PMID40510864
PMCPMC12159543

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.